Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSSCA1O60232 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSSCA1O60232 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.66■□□□□ 0.26
SSSCA1O60232 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.66■□□□□ 0.26
SSSCA1O60232 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.66■□□□□ 0.26
SSSCA1O60232 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSSCA1O60232 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SSSCA1O60232 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SSSCA1O60232 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSSCA1O60232 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSSCA1O60232 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SSSCA1O60232 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
SSSCA1O60232 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSSCA1O60232 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSSCA1O60232 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSSCA1O60232 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSSCA1O60232 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SSSCA1O60232 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SSSCA1O60232 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSSCA1O60232 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SSSCA1O60232 CREM-229ENST00000474362 1030 ntTSL 2 BASIC16.65■□□□□ 0.26
SSSCA1O60232 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC16.65■□□□□ 0.26
SSSCA1O60232 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC16.65■□□□□ 0.26
SSSCA1O60232 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.65■□□□□ 0.26
SSSCA1O60232 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSSCA1O60232 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC16.65■□□□□ 0.26
SSSCA1O60232 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSSCA1O60232 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.65■□□□□ 0.26
SSSCA1O60232 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSSCA1O60232 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.65■□□□□ 0.26
SSSCA1O60232 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.65■□□□□ 0.26
SSSCA1O60232 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSSCA1O60232 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SSSCA1O60232 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
SSSCA1O60232 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.64■□□□□ 0.26
SSSCA1O60232 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SSSCA1O60232 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.64■□□□□ 0.25
SSSCA1O60232 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSSCA1O60232 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SSSCA1O60232 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSSCA1O60232 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSSCA1O60232 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSSCA1O60232 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SSSCA1O60232 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SSSCA1O60232 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSSCA1O60232 HES6-206ENST00000409574 738 ntTSL 2 BASIC16.64■□□□□ 0.25
SSSCA1O60232 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SSSCA1O60232 SLC47A1P1-202ENST00000449666 945 ntBASIC16.64■□□□□ 0.25
SSSCA1O60232 AC009299.2-201ENST00000482477 511 ntBASIC16.64■□□□□ 0.25
SSSCA1O60232 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC16.64■□□□□ 0.25
SSSCA1O60232 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SSSCA1O60232 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC16.64■□□□□ 0.25
SSSCA1O60232 AL356740.2-201ENST00000601559 647 ntBASIC16.64■□□□□ 0.25
SSSCA1O60232 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SSSCA1O60232 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC16.64■□□□□ 0.25
SSSCA1O60232 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC16.64■□□□□ 0.25
SSSCA1O60232 AC092720.2-201ENST00000602388 1665 ntBASIC16.64■□□□□ 0.25
SSSCA1O60232 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSSCA1O60232 AC098818.2-201ENST00000564925 2320 ntBASIC16.64■□□□□ 0.25
SSSCA1O60232 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSSCA1O60232 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSSCA1O60232 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSSCA1O60232 BX005040.4-201ENST00000637145 1518 ntBASIC16.64■□□□□ 0.25
SSSCA1O60232 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SSSCA1O60232 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSSCA1O60232 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.64■□□□□ 0.25
SSSCA1O60232 PXK-203ENST00000383715 1756 ntTSL 5 BASIC16.64■□□□□ 0.25
SSSCA1O60232 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSSCA1O60232 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSSCA1O60232 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSSCA1O60232 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SSSCA1O60232 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
SSSCA1O60232 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSSCA1O60232 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSSCA1O60232 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.63■□□□□ 0.25
SSSCA1O60232 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SSSCA1O60232 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SSSCA1O60232 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSSCA1O60232 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSSCA1O60232 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.63■□□□□ 0.25
SSSCA1O60232 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.63■□□□□ 0.25
SSSCA1O60232 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SSSCA1O60232 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.63■□□□□ 0.25
SSSCA1O60232 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SSSCA1O60232 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.63■□□□□ 0.25
SSSCA1O60232 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSSCA1O60232 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSSCA1O60232 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSSCA1O60232 AC011484.1-201ENST00000377652 1995 ntBASIC16.63■□□□□ 0.25
SSSCA1O60232 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
SSSCA1O60232 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSSCA1O60232 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.63■□□□□ 0.25
SSSCA1O60232 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SSSCA1O60232 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16.63■□□□□ 0.25
SSSCA1O60232 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.63■□□□□ 0.25
SSSCA1O60232 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.63■□□□□ 0.25
SSSCA1O60232 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSSCA1O60232 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SSSCA1O60232 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
SSSCA1O60232 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms