Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
RRP8O43159 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RRP8O43159 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RRP8O43159 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RRP8O43159 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.3■□□□□ 0.68
RRP8O43159 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.3■□□□□ 0.68
RRP8O43159 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RRP8O43159 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
RRP8O43159 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
RRP8O43159 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.3■□□□□ 0.68
RRP8O43159 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.3■□□□□ 0.68
RRP8O43159 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.3■□□□□ 0.68
RRP8O43159 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RRP8O43159 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.3■□□□□ 0.68
RRP8O43159 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.3■□□□□ 0.68
RRP8O43159 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.3■□□□□ 0.68
RRP8O43159 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RRP8O43159 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.3■□□□□ 0.68
RRP8O43159 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RRP8O43159 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RRP8O43159 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RRP8O43159 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.3■□□□□ 0.68
RRP8O43159 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.3■□□□□ 0.68
RRP8O43159 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
RRP8O43159 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RRP8O43159 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RRP8O43159 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RRP8O43159 AC003102.1-202ENST00000563394 1796 ntBASIC19.29■□□□□ 0.68
RRP8O43159 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
RRP8O43159 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RRP8O43159 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RRP8O43159 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RRP8O43159 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.29■□□□□ 0.68
RRP8O43159 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RRP8O43159 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.29■□□□□ 0.68
RRP8O43159 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.29■□□□□ 0.68
RRP8O43159 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RRP8O43159 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.29■□□□□ 0.68
RRP8O43159 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.29■□□□□ 0.68
RRP8O43159 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.29■□□□□ 0.68
RRP8O43159 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.29■□□□□ 0.68
RRP8O43159 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.29■□□□□ 0.68
RRP8O43159 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.29■□□□□ 0.68
RRP8O43159 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RRP8O43159 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RRP8O43159 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RRP8O43159 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RRP8O43159 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RRP8O43159 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RRP8O43159 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RRP8O43159 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.29■□□□□ 0.68
RRP8O43159 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RRP8O43159 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.28■□□□□ 0.68
RRP8O43159 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.28■□□□□ 0.68
RRP8O43159 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RRP8O43159 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RRP8O43159 AC005829.2-201ENST00000571422 1056 ntBASIC19.28■□□□□ 0.68
RRP8O43159 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.28■□□□□ 0.68
RRP8O43159 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RRP8O43159 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.28■□□□□ 0.68
RRP8O43159 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RRP8O43159 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RRP8O43159 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
RRP8O43159 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RRP8O43159 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RRP8O43159 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RRP8O43159 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RRP8O43159 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RRP8O43159 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RRP8O43159 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RRP8O43159 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RRP8O43159 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.27■□□□□ 0.68
RRP8O43159 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
RRP8O43159 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RRP8O43159 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.27■□□□□ 0.68
RRP8O43159 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.27■□□□□ 0.68
RRP8O43159 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.27■□□□□ 0.68
RRP8O43159 AC145285.6-201ENST00000604632 637 ntBASIC19.27■□□□□ 0.68
RRP8O43159 AC006557.6-201ENST00000623071 864 ntBASIC19.27■□□□□ 0.68
RRP8O43159 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RRP8O43159 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RRP8O43159 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.27■□□□□ 0.68
RRP8O43159 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RRP8O43159 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RRP8O43159 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RRP8O43159 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RRP8O43159 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RRP8O43159 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.26■□□□□ 0.67
RRP8O43159 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RRP8O43159 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RRP8O43159 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.26■□□□□ 0.67
RRP8O43159 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RRP8O43159 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RRP8O43159 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RRP8O43159 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RRP8O43159 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RRP8O43159 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RRP8O43159 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.26■□□□□ 0.67
RRP8O43159 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.26■□□□□ 0.67
RRP8O43159 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms