Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNFRSF11BO00300 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNFRSF11BO00300 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
TNFRSF11BO00300 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNFRSF11BO00300 TCF3P1-201ENST00000423021 1937 ntBASIC18.9■□□□□ 0.62
TNFRSF11BO00300 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
TNFRSF11BO00300 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.9■□□□□ 0.62
TNFRSF11BO00300 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TNFRSF11BO00300 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.9■□□□□ 0.62
TNFRSF11BO00300 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.9■□□□□ 0.62
TNFRSF11BO00300 AC008764.7-201ENST00000593779 1081 ntBASIC18.9■□□□□ 0.62
TNFRSF11BO00300 AL136162.1-201ENST00000607711 1078 ntBASIC18.9■□□□□ 0.62
TNFRSF11BO00300 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNFRSF11BO00300 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNFRSF11BO00300 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.9■□□□□ 0.62
TNFRSF11BO00300 TSPY26P-201ENST00000476365 1326 ntBASIC18.9■□□□□ 0.62
TNFRSF11BO00300 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNFRSF11BO00300 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.9■□□□□ 0.62
TNFRSF11BO00300 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNFRSF11BO00300 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TNFRSF11BO00300 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TNFRSF11BO00300 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNFRSF11BO00300 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.9■□□□□ 0.62
TNFRSF11BO00300 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
TNFRSF11BO00300 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.89■□□□□ 0.62
TNFRSF11BO00300 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
TNFRSF11BO00300 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.89■□□□□ 0.61
TNFRSF11BO00300 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TNFRSF11BO00300 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.89■□□□□ 0.61
TNFRSF11BO00300 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TNFRSF11BO00300 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TNFRSF11BO00300 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.89■□□□□ 0.61
TNFRSF11BO00300 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.89■□□□□ 0.61
TNFRSF11BO00300 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.89■□□□□ 0.61
TNFRSF11BO00300 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TNFRSF11BO00300 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TNFRSF11BO00300 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TNFRSF11BO00300 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFRSF11BO00300 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.88■□□□□ 0.61
TNFRSF11BO00300 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFRSF11BO00300 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFRSF11BO00300 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFRSF11BO00300 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.88■□□□□ 0.61
TNFRSF11BO00300 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TNFRSF11BO00300 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFRSF11BO00300 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TNFRSF11BO00300 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.88■□□□□ 0.61
TNFRSF11BO00300 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TNFRSF11BO00300 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.88■□□□□ 0.61
TNFRSF11BO00300 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.88■□□□□ 0.61
TNFRSF11BO00300 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.88■□□□□ 0.61
TNFRSF11BO00300 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TNFRSF11BO00300 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TNFRSF11BO00300 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TNFRSF11BO00300 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFRSF11BO00300 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFRSF11BO00300 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFRSF11BO00300 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TNFRSF11BO00300 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFRSF11BO00300 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TNFRSF11BO00300 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.87■□□□□ 0.61
TNFRSF11BO00300 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TNFRSF11BO00300 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
TNFRSF11BO00300 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TNFRSF11BO00300 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
TNFRSF11BO00300 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TNFRSF11BO00300 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.87■□□□□ 0.61
TNFRSF11BO00300 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.87■□□□□ 0.61
TNFRSF11BO00300 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TNFRSF11BO00300 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.87■□□□□ 0.61
TNFRSF11BO00300 AC135279.3-201ENST00000610945 1311 ntBASIC18.87■□□□□ 0.61
TNFRSF11BO00300 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TNFRSF11BO00300 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TNFRSF11BO00300 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNFRSF11BO00300 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNFRSF11BO00300 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNFRSF11BO00300 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TNFRSF11BO00300 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNFRSF11BO00300 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNFRSF11BO00300 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.86■□□□□ 0.61
TNFRSF11BO00300 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNFRSF11BO00300 AC099791.1-201ENST00000416440 715 ntBASIC18.86■□□□□ 0.61
TNFRSF11BO00300 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.86■□□□□ 0.61
TNFRSF11BO00300 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TNFRSF11BO00300 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.86■□□□□ 0.61
TNFRSF11BO00300 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNFRSF11BO00300 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.86■□□□□ 0.61
TNFRSF11BO00300 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TNFRSF11BO00300 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TNFRSF11BO00300 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
TNFRSF11BO00300 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TNFRSF11BO00300 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TNFRSF11BO00300 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.85■□□□□ 0.61
TNFRSF11BO00300 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TNFRSF11BO00300 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TNFRSF11BO00300 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TNFRSF11BO00300 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TNFRSF11BO00300 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.85■□□□□ 0.61
TNFRSF11BO00300 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.85■□□□□ 0.61
TNFRSF11BO00300 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms