Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHISA3A0PJX4 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SHISA3A0PJX4 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.86■□□□□ 0.45
SHISA3A0PJX4 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHISA3A0PJX4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
SHISA3A0PJX4 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.86■□□□□ 0.45
SHISA3A0PJX4 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.86■□□□□ 0.45
SHISA3A0PJX4 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.86■□□□□ 0.45
SHISA3A0PJX4 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.86■□□□□ 0.45
SHISA3A0PJX4 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SHISA3A0PJX4 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.86■□□□□ 0.45
SHISA3A0PJX4 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SHISA3A0PJX4 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHISA3A0PJX4 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC17.86■□□□□ 0.45
SHISA3A0PJX4 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHISA3A0PJX4 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHISA3A0PJX4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHISA3A0PJX4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SHISA3A0PJX4 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
SHISA3A0PJX4 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.86■□□□□ 0.45
SHISA3A0PJX4 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHISA3A0PJX4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SHISA3A0PJX4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.86■□□□□ 0.45
SHISA3A0PJX4 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.86■□□□□ 0.45
SHISA3A0PJX4 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SHISA3A0PJX4 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SHISA3A0PJX4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SHISA3A0PJX4 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.85■□□□□ 0.45
SHISA3A0PJX4 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SHISA3A0PJX4 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.85■□□□□ 0.45
SHISA3A0PJX4 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
SHISA3A0PJX4 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.85■□□□□ 0.45
SHISA3A0PJX4 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.85■□□□□ 0.45
SHISA3A0PJX4 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SHISA3A0PJX4 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SHISA3A0PJX4 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SHISA3A0PJX4 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.85■□□□□ 0.45
SHISA3A0PJX4 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SHISA3A0PJX4 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SHISA3A0PJX4 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.85■□□□□ 0.45
SHISA3A0PJX4 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
SHISA3A0PJX4 AL035685.1-201ENST00000636663 812 ntBASIC17.85■□□□□ 0.45
SHISA3A0PJX4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SHISA3A0PJX4 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHISA3A0PJX4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SHISA3A0PJX4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHISA3A0PJX4 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
SHISA3A0PJX4 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.84■□□□□ 0.45
SHISA3A0PJX4 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.84■□□□□ 0.45
SHISA3A0PJX4 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
SHISA3A0PJX4 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
SHISA3A0PJX4 AC009237.3-201ENST00000393279 1427 ntBASIC17.84■□□□□ 0.45
SHISA3A0PJX4 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.84■□□□□ 0.45
SHISA3A0PJX4 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.84■□□□□ 0.45
SHISA3A0PJX4 AC011298.3-201ENST00000615796 283 ntBASIC17.84■□□□□ 0.45
SHISA3A0PJX4 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.84■□□□□ 0.45
SHISA3A0PJX4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.84■□□□□ 0.45
SHISA3A0PJX4 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.84■□□□□ 0.45
SHISA3A0PJX4 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.84■□□□□ 0.45
SHISA3A0PJX4 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SHISA3A0PJX4 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHISA3A0PJX4 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHISA3A0PJX4 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHISA3A0PJX4 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.84■□□□□ 0.45
SHISA3A0PJX4 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHISA3A0PJX4 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
SHISA3A0PJX4 AC061975.6-201ENST00000579045 1553 ntBASIC17.83■□□□□ 0.45
SHISA3A0PJX4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SHISA3A0PJX4 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SHISA3A0PJX4 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SHISA3A0PJX4 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SHISA3A0PJX4 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.83■□□□□ 0.44
SHISA3A0PJX4 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SHISA3A0PJX4 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.83■□□□□ 0.44
SHISA3A0PJX4 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
SHISA3A0PJX4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.83■□□□□ 0.44
SHISA3A0PJX4 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
SHISA3A0PJX4 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SHISA3A0PJX4 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SHISA3A0PJX4 AC093484.2-201ENST00000580996 2166 ntBASIC17.83■□□□□ 0.44
SHISA3A0PJX4 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHISA3A0PJX4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHISA3A0PJX4 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHISA3A0PJX4 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.82■□□□□ 0.44
SHISA3A0PJX4 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.82■□□□□ 0.44
SHISA3A0PJX4 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
SHISA3A0PJX4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.82■□□□□ 0.44
SHISA3A0PJX4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHISA3A0PJX4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHISA3A0PJX4 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHISA3A0PJX4 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHISA3A0PJX4 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SHISA3A0PJX4 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SHISA3A0PJX4 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.82■□□□□ 0.44
SHISA3A0PJX4 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHISA3A0PJX4 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHISA3A0PJX4 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHISA3A0PJX4 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SHISA3A0PJX4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SHISA3A0PJX4 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms