Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.77■□□□□ 0.44
TRBV5-5A0A0J9YX44 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV5-5A0A0J9YX44 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.77■□□□□ 0.44
TRBV5-5A0A0J9YX44 AC245052.3-201ENST00000450182 901 ntBASIC17.77■□□□□ 0.44
TRBV5-5A0A0J9YX44 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.77■□□□□ 0.44
TRBV5-5A0A0J9YX44 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.77■□□□□ 0.44
TRBV5-5A0A0J9YX44 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRBV5-5A0A0J9YX44 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRBV5-5A0A0J9YX44 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.77■□□□□ 0.43
TRBV5-5A0A0J9YX44 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRBV5-5A0A0J9YX44 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRBV5-5A0A0J9YX44 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TRBV5-5A0A0J9YX44 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV5-5A0A0J9YX44 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV5-5A0A0J9YX44 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.76■□□□□ 0.43
TRBV5-5A0A0J9YX44 KRT16P2-201ENST00000414673 1423 ntBASIC17.76■□□□□ 0.43
TRBV5-5A0A0J9YX44 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV5-5A0A0J9YX44 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.76■□□□□ 0.43
TRBV5-5A0A0J9YX44 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.76■□□□□ 0.43
TRBV5-5A0A0J9YX44 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV5-5A0A0J9YX44 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
TRBV5-5A0A0J9YX44 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.76■□□□□ 0.43
TRBV5-5A0A0J9YX44 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.76■□□□□ 0.43
TRBV5-5A0A0J9YX44 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.76■□□□□ 0.43
TRBV5-5A0A0J9YX44 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.76■□□□□ 0.43
TRBV5-5A0A0J9YX44 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV5-5A0A0J9YX44 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV5-5A0A0J9YX44 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV5-5A0A0J9YX44 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.76■□□□□ 0.43
TRBV5-5A0A0J9YX44 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV5-5A0A0J9YX44 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.75■□□□□ 0.43
TRBV5-5A0A0J9YX44 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV5-5A0A0J9YX44 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TRBV5-5A0A0J9YX44 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV5-5A0A0J9YX44 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.75■□□□□ 0.43
TRBV5-5A0A0J9YX44 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV5-5A0A0J9YX44 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV5-5A0A0J9YX44 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
TRBV5-5A0A0J9YX44 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV5-5A0A0J9YX44 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.75■□□□□ 0.43
TRBV5-5A0A0J9YX44 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV5-5A0A0J9YX44 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV5-5A0A0J9YX44 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV5-5A0A0J9YX44 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.75■□□□□ 0.43
TRBV5-5A0A0J9YX44 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TRBV5-5A0A0J9YX44 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV5-5A0A0J9YX44 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV5-5A0A0J9YX44 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV5-5A0A0J9YX44 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TRBV5-5A0A0J9YX44 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV5-5A0A0J9YX44 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV5-5A0A0J9YX44 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV5-5A0A0J9YX44 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
TRBV5-5A0A0J9YX44 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV5-5A0A0J9YX44 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
TRBV5-5A0A0J9YX44 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
TRBV5-5A0A0J9YX44 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
TRBV5-5A0A0J9YX44 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.74■□□□□ 0.43
TRBV5-5A0A0J9YX44 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.74■□□□□ 0.43
TRBV5-5A0A0J9YX44 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV5-5A0A0J9YX44 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV5-5A0A0J9YX44 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV5-5A0A0J9YX44 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.74■□□□□ 0.43
TRBV5-5A0A0J9YX44 RASA4CP-201ENST00000424092 1398 ntBASIC17.74■□□□□ 0.43
TRBV5-5A0A0J9YX44 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV5-5A0A0J9YX44 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV5-5A0A0J9YX44 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV5-5A0A0J9YX44 AC116562.4-201ENST00000641316 2276 ntBASIC17.74■□□□□ 0.43
TRBV5-5A0A0J9YX44 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
TRBV5-5A0A0J9YX44 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TRBV5-5A0A0J9YX44 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV5-5A0A0J9YX44 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV5-5A0A0J9YX44 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.74■□□□□ 0.43
TRBV5-5A0A0J9YX44 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV5-5A0A0J9YX44 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV5-5A0A0J9YX44 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV5-5A0A0J9YX44 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV5-5A0A0J9YX44 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV5-5A0A0J9YX44 EDA-201ENST00000338901 1233 ntBASIC17.73■□□□□ 0.43
TRBV5-5A0A0J9YX44 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV5-5A0A0J9YX44 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.73■□□□□ 0.43
TRBV5-5A0A0J9YX44 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.73■□□□□ 0.43
TRBV5-5A0A0J9YX44 AC138907.5-202ENST00000569484 235 ntBASIC17.73■□□□□ 0.43
TRBV5-5A0A0J9YX44 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
TRBV5-5A0A0J9YX44 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.73■□□□□ 0.43
TRBV5-5A0A0J9YX44 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV5-5A0A0J9YX44 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV5-5A0A0J9YX44 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV5-5A0A0J9YX44 KRT87P-202ENST00000534226 1464 ntBASIC17.73■□□□□ 0.43
TRBV5-5A0A0J9YX44 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
TRBV5-5A0A0J9YX44 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV5-5A0A0J9YX44 AC116050.2-201ENST00000612102 1779 ntBASIC17.73■□□□□ 0.43
TRBV5-5A0A0J9YX44 BX323043.1-201ENST00000641006 1765 ntBASIC17.73■□□□□ 0.43
TRBV5-5A0A0J9YX44 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.73■□□□□ 0.43
TRBV5-5A0A0J9YX44 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.73■□□□□ 0.43
TRBV5-5A0A0J9YX44 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TRBV5-5A0A0J9YX44 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.73■□□□□ 0.43
TRBV5-5A0A0J9YX44 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.73■□□□□ 0.43
TRBV5-5A0A0J9YX44 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TRBV5-5A0A0J9YX44 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms