Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAV4A0A0B4J268 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC14.72□□□□□ -0.05
TRAV4A0A0B4J268 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC14.72□□□□□ -0.05
TRAV4A0A0B4J268 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAV4A0A0B4J268 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV4A0A0B4J268 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV4A0A0B4J268 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV4A0A0B4J268 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV4A0A0B4J268 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV4A0A0B4J268 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
TRAV4A0A0B4J268 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV4A0A0B4J268 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV4A0A0B4J268 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV4A0A0B4J268 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC14.72□□□□□ -0.05
TRAV4A0A0B4J268 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV4A0A0B4J268 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
TRAV4A0A0B4J268 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAV4A0A0B4J268 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV4A0A0B4J268 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAV4A0A0B4J268 FEM1AP1-201ENST00000431297 1995 ntBASIC14.71□□□□□ -0.05
TRAV4A0A0B4J268 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV4A0A0B4J268 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
TRAV4A0A0B4J268 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
TRAV4A0A0B4J268 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
TRAV4A0A0B4J268 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAV4A0A0B4J268 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV4A0A0B4J268 AC004854.2-201ENST00000608450 1441 ntBASIC14.71□□□□□ -0.05
TRAV4A0A0B4J268 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV4A0A0B4J268 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
TRAV4A0A0B4J268 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
TRAV4A0A0B4J268 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV4A0A0B4J268 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC14.71□□□□□ -0.06
TRAV4A0A0B4J268 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV4A0A0B4J268 AC007225.1-201ENST00000566331 1836 ntBASIC14.71□□□□□ -0.06
TRAV4A0A0B4J268 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC14.71□□□□□ -0.06
TRAV4A0A0B4J268 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC14.71□□□□□ -0.06
TRAV4A0A0B4J268 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV4A0A0B4J268 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV4A0A0B4J268 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV4A0A0B4J268 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV4A0A0B4J268 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV4A0A0B4J268 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV4A0A0B4J268 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
TRAV4A0A0B4J268 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV4A0A0B4J268 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.06
TRAV4A0A0B4J268 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV4A0A0B4J268 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV4A0A0B4J268 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAV4A0A0B4J268 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TRAV4A0A0B4J268 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV4A0A0B4J268 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV4A0A0B4J268 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAV4A0A0B4J268 SLC7A5P2-201ENST00000553010 536 ntBASIC14.7□□□□□ -0.06
TRAV4A0A0B4J268 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAV4A0A0B4J268 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV4A0A0B4J268 STAC-204ENST00000457375 1366 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV4A0A0B4J268 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV4A0A0B4J268 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV4A0A0B4J268 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV4A0A0B4J268 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV4A0A0B4J268 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV4A0A0B4J268 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV4A0A0B4J268 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAV4A0A0B4J268 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV4A0A0B4J268 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV4A0A0B4J268 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV4A0A0B4J268 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV4A0A0B4J268 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV4A0A0B4J268 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV4A0A0B4J268 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV4A0A0B4J268 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV4A0A0B4J268 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV4A0A0B4J268 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV4A0A0B4J268 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV4A0A0B4J268 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TRAV4A0A0B4J268 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV4A0A0B4J268 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV4A0A0B4J268 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV4A0A0B4J268 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV4A0A0B4J268 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
TRAV4A0A0B4J268 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV4A0A0B4J268 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV4A0A0B4J268 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC14.69□□□□□ -0.06
TRAV4A0A0B4J268 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV4A0A0B4J268 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
TRAV4A0A0B4J268 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV4A0A0B4J268 SLC7A5P1-201ENST00000568957 537 ntBASIC14.69□□□□□ -0.06
TRAV4A0A0B4J268 GALNS-213ENST00000569433 723 ntTSL 3 BASIC14.69□□□□□ -0.06
TRAV4A0A0B4J268 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV4A0A0B4J268 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV4A0A0B4J268 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
TRAV4A0A0B4J268 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV4A0A0B4J268 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC14.69□□□□□ -0.06
TRAV4A0A0B4J268 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV4A0A0B4J268 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
TRAV4A0A0B4J268 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TRAV4A0A0B4J268 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV4A0A0B4J268 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV4A0A0B4J268 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV4A0A0B4J268 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms