Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 CSTL1-202ENST00000347397 736 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 IL37-205ENST00000353225 652 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 OR51D1-201ENST00000357605 1124 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 FCRLA-207ENST00000367950 823 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 FAM209B-201ENST00000371325 694 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 MIR1306-201ENST00000408439 85 ntBASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 OR51A8P-201ENST00000421277 940 ntBASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 AL078599.2-201ENST00000457116 471 ntTSL 3 BASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 AC097493.2-201ENST00000468675 780 ntBASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 WBP1LP2-201ENST00000515260 998 ntBASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 OSGEPL1-AS1-201ENST00000520651 508 ntTSL 2 BASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 OR7E8P-201ENST00000532847 1000 ntBASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 UBE2N-206ENST00000552442 607 ntTSL 5 BASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 ZNF528-210ENST00000594530 544 ntTSL 3 BASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 TRAM2-AS1-202ENST00000605910 1053 ntTSL 3 BASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 PCDH18-206ENST00000611581 819 ntTSL 4 BASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 SNX18P5-201ENST00000619873 868 ntBASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 Metazoa_SRP.30-201ENST00000621054 280 ntBASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 AC092139.3-201ENST00000624764 968 ntBASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 AL109920.1-201ENST00000632749 415 ntTSL 2 BASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 LIAS-210ENST00000638451 1159 ntTSL 5 BASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 OR51A8P-202ENST00000641606 1038 ntBASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 NPIPB10P-201ENST00000424293 1354 ntBASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 PSMC2-206ENST00000640277 1357 ntTSL 5 BASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 PIGN-230ENST00000638977 4601 ntTSL 5 BASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 DMP1-202ENST00000339673 2682 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 CR786580.1-201ENST00000417843 2878 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 LINC01410-201ENST00000424345 2877 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 STYK1-201ENST00000075503 2995 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 RBBP9-201ENST00000337227 3861 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 NEDD4L-203ENST00000357895 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 PTPRA-202ENST00000318266 3219 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 ZNF385B-203ENST00000409692 2109 ntTSL 5 BASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 RHAG-202ENST00000371175 1912 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 SYNE1-230ENST00000495090 1907 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 CYP2C9-201ENST00000260682 1847 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 MEF2A-203ENST00000449277 5182 ntTSL 5 BASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 SLC7A13-202ENST00000419776 1618 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 PSMA5-206ENST00000538610 1504 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 MAN1A2P1-201ENST00000590286 1400 ntBASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 AC133561.2-202ENST00000561642 1301 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 PIGN-251ENST00000640876 6045 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 RPE-201ENST00000354506 3165 ntTSL 2 BASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 KCNE1-206ENST00000432085 3184 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 ACVR1-202ENST00000409283 2879 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 MTHFD2P1-203ENST00000494840 2595 ntTSL 2 BASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 MOV10L1-209ENST00000540615 3941 ntAPPRIS ALT2 TSL 2 BASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 SUN1-219ENST00000452783 3717 ntTSL 2 BASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 CBFA2T2-210ENST00000543126 3502 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 FGB-201ENST00000302068 1975 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 AL023755.1-202ENST00000636459 1665 ntTSL 5 BASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 AC019330.1-201ENST00000637390 1692 ntTSL 5 BASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 PDPN-212ENST00000621990 2738 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 ARL6-202ENST00000394206 1590 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 ELOC-205ENST00000520210 1451 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 AL392183.1-201ENST00000606622 2436 ntTSL 4 BASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 PTK2B-201ENST00000346049 4147 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 TPM3-201ENST00000271850 1219 ntAPPRIS ALT1 TSL 5 BASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 RPL11-201ENST00000374550 634 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 LST1-209ENST00000376096 565 ntTSL 2 BASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 TUBB4BP7-201ENST00000406999 1234 ntBASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 KCNIP1-204ENST00000411494 684 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 AC012506.2-201ENST00000426527 533 ntTSL 4 BASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 AC012501.2-201ENST00000437634 1281 ntBASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 MDC1-AS1-201ENST00000442150 738 ntTSL 3 BASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 TMEM97P1-201ENST00000452969 451 ntBASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 RN7SL35P-201ENST00000466169 292 ntBASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 LINC00491-201ENST00000505527 722 ntTSL 3 BASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 AC022296.1-201ENST00000512176 682 ntBASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 DROSHA-220ENST00000513349 4681 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 RPL23AP96-201ENST00000514593 591 ntBASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 AP003108.2-208ENST00000543044 883 ntTSL 3 BASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 AC006927.1-201ENST00000544818 498 ntBASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 AL442663.4-201ENST00000555304 289 ntBASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 LINC02321-201ENST00000555975 384 ntTSL 3 BASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 OR11K1P-201ENST00000558299 904 ntBASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 AC132186.1-201ENST00000566896 354 ntBASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 TTC39A-AS1-202ENST00000568425 554 ntTSL 3 BASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 AC009133.1-204ENST00000569809 967 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 AC068152.1-202ENST00000571901 808 ntTSL 3 BASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 LAMTOR5-AS1-211ENST00000598350 749 ntTSL 5 BASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 PPP3CB-AS1-211ENST00000600887 489 ntTSL 5 BASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 CCL4L2-218ENST00000620576 652 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 PTPN3-204ENST00000446349 8630 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 LINC01278-205ENST00000609401 2886 ntTSL 2 BASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 AC024610.2-204ENST00000637478 2867 ntTSL 5 BASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 NF1P9-201ENST00000629326 2008 ntBASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 PEG10-202ENST00000482108 6618 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 LRRC8D-202ENST00000394593 3345 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 TIMP2-203ENST00000585421 3345 ntTSL 3 BASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 SLC17A1-201ENST00000244527 1844 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 PLCD4-203ENST00000432688 3225 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 ACLY-207ENST00000590151 4309 ntAPPRIS P4 TSL 1 (best) BASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 GJB2-202ENST00000382848 2250 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 LINC02357-201ENST00000637313 1622 ntTSL 5 BASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 ERC1-225ENST00000611180 2832 ntTSL 5 BASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 RBBP8-205ENST00000399725 3260 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
NPIPA3F8WFD2 GOSR2-220ENST00000638838 3266 ntAPPRIS ALT1 TSL 5 BASIC8.28□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms