RNA–Protein interactions for RNA: ENST00000629326.1

NF1P9-201, Transcript of neurofibromin 1 pseudogene 9, humanhuman

BASIC

Gene NF1P9, Length 2,008 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1P9-201ENST00000629326 NISCHQ9Y2I1 1504 aa19.46■□□□□ 0.71
NF1P9-201ENST00000629326 CCDC180Q9P1Z9 1646 aa16.56■□□□□ 0.24
NF1P9-201ENST00000629326 ZCCHC6Q5VYS8 1495 aaKnown RBP16.52■□□□□ 0.23
NF1P9-201ENST00000629326 SHROOM4Q9ULL8 1493 aa16.46■□□□□ 0.23
NF1P9-201ENST00000629326 SUPT5HO00267 1087 aaKnown RBP16.21■□□□□ 0.19
NF1P9-201ENST00000629326 DCAF1Q9Y4B6 1507 aa16.08■□□□□ 0.17
NF1P9-201ENST00000629326 CHIC1Q5VXU3 224 aa15.95■□□□□ 0.14
NF1P9-201ENST00000629326 MYO15BQ96JP2 1530 aa15.9■□□□□ 0.14
NF1P9-201ENST00000629326 DCAF8L2P0C7V8 631 aa15.81■□□□□ 0.12
NF1P9-201ENST00000629326 HRCP23327 699 aa15.73■□□□□ 0.11
NF1P9-201ENST00000629326 ABCC9O60706 1549 aa15.62■□□□□ 0.09
NF1P9-201ENST00000629326 PCGF6Q9BYE7 350 aa15.51■□□□□ 0.07
NF1P9-201ENST00000629326 RSF1Q96T23 1441 aaPredicted RBP15.41■□□□□ 0.06
NF1P9-201ENST00000629326 SCRIBQ14160 1630 aa15.38■□□□□ 0.05
NF1P9-201ENST00000629326 LOC105371045A0A1W2PR82 267 aa15.36■□□□□ 0.05
NF1P9-201ENST00000629326 RB1CC1Q8TDY2 1594 aa15.33■□□□□ 0.04
NF1P9-201ENST00000629326 TRIM26Q12899 539 aaPredicted RBP15.31■□□□□ 0.04
NF1P9-201ENST00000629326 NACADO15069 1562 aa15.26■□□□□ 0.03
NF1P9-201ENST00000629326 PPARGC1BQ86YN6 1023 aaKnown RBP15.21■□□□□ 0.03
NF1P9-201ENST00000629326 TRIM41Q8WV44 630 aa15.18■□□□□ 0.02
NF1P9-201ENST00000629326 ZEB1P37275 1124 aaPredicted RBP15.12■□□□□ 0.01
NF1P9-201ENST00000629326 MROH2BQ7Z745 1585 aa15.07■□□□□ 0
NF1P9-201ENST00000629326 CECR2Q9BXF3 1484 aa15.07■□□□□ 0
NF1P9-201ENST00000629326 BAZ1AQ9NRL2 1556 aaPredicted RBP15.01□□□□□ -0.01
NF1P9-201ENST00000629326 WIZO95785 1651 aa14.98□□□□□ -0.01
NF1P9-201ENST00000629326 EIF4G1Q04637 1599 aaKnown RBP14.96□□□□□ -0.01
NF1P9-201ENST00000629326 FAM9AQ8IZU1 332 aaPredicted RBP14.93□□□□□ -0.02
NF1P9-201ENST00000629326 TOP2AP11388 1531 aaKnown RBP14.85□□□□□ -0.03
NF1P9-201ENST00000629326 SMARCA4P51532 1647 aa14.79□□□□□ -0.04
NF1P9-201ENST00000629326 WRNQ14191 1432 aaPredicted RBP eCLIP14.74□□□□□ -0.05
NF1P9-201ENST00000629326 SMARCA2P51531 1590 aa14.74□□□□□ -0.05
NF1P9-201ENST00000629326 CCDC88BA6NC98 1476 aa14.72□□□□□ -0.05
NF1P9-201ENST00000629326 EEA1Q15075 1411 aa14.7□□□□□ -0.06
NF1P9-201ENST00000629326 EHMT2Q96KQ7 1210 aa14.7□□□□□ -0.06
NF1P9-201ENST00000629326 ABCC8Q09428 1581 aa14.67□□□□□ -0.06
NF1P9-201ENST00000629326 UNC13AQ9UPW8 1703 aa14.66□□□□□ -0.06
NF1P9-201ENST00000629326 TNIKQ9UKE5 1360 aa14.64□□□□□ -0.07
NF1P9-201ENST00000629326 CEP162Q5TB80 1403 aa14.62□□□□□ -0.07
NF1P9-201ENST00000629326 PELP1Q8IZL8 1130 aaKnown RBP14.58□□□□□ -0.08
NF1P9-201ENST00000629326 PEG3Q9GZU2 1588 aa14.58□□□□□ -0.08
NF1P9-201ENST00000629326 CCER1Q8TC90 406 aaPredicted RBP14.57□□□□□ -0.08
NF1P9-201ENST00000629326 SOGA1O94964 1423 aa14.57□□□□□ -0.08
NF1P9-201ENST00000629326 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.54□□□□□ -0.08
NF1P9-201ENST00000629326 GOLGA3Q08378 1498 aa14.54□□□□□ -0.08
NF1P9-201ENST00000629326 CSRNP3Q8WYN3 585 aa14.53□□□□□ -0.08
NF1P9-201ENST00000629326 SCAF1Q9H7N4 1312 aaKnown RBP14.52□□□□□ -0.09
NF1P9-201ENST00000629326 BICRAQ9NZM4 1560 aa14.49□□□□□ -0.09
NF1P9-201ENST00000629326 RUSC2Q8N2Y8 1516 aa14.46□□□□□ -0.09
NF1P9-201ENST00000629326 KIF21BO75037 1637 aa14.46□□□□□ -0.09
NF1P9-201ENST00000629326 CEP164Q9UPV0 1460 aa14.44□□□□□ -0.1
NF1P9-201ENST00000629326 UBTFP17480 764 aaKnown RBP14.41□□□□□ -0.1
NF1P9-201ENST00000629326 ACIN1Q9UKV3 1341 aaKnown RBP14.4□□□□□ -0.1
NF1P9-201ENST00000629326 SYNJ1O43426 1573 aa14.39□□□□□ -0.11
NF1P9-201ENST00000629326 DIEXFQ68CQ4 756 aaKnown RBP14.39□□□□□ -0.11
NF1P9-201ENST00000629326 BAZ1BQ9UIG0 1483 aaKnown RBP14.38□□□□□ -0.11
NF1P9-201ENST00000629326 ATAD2BQ9ULI0 1458 aa14.36□□□□□ -0.11
NF1P9-201ENST00000629326 CENPBP07199 599 aaPredicted RBP14.34□□□□□ -0.11
NF1P9-201ENST00000629326 CLIP1P30622 1438 aa14.32□□□□□ -0.12
NF1P9-201ENST00000629326 VPS8Q8N3P4 1428 aa14.32□□□□□ -0.12
NF1P9-201ENST00000629326 PABPN1Q86U42 306 aaKnown RBP eCLIP14.3□□□□□ -0.12
NF1P9-201ENST00000629326 TTBK1Q5TCY1 1321 aaPredicted RBP14.3□□□□□ -0.12
NF1P9-201ENST00000629326 NEUROD1Q13562 356 aa14.29□□□□□ -0.12
NF1P9-201ENST00000629326 ZNF316A6NFI3 1004 aaPredicted RBP14.28□□□□□ -0.12
NF1P9-201ENST00000629326 TOP2BQ02880 1626 aa14.26□□□□□ -0.13
NF1P9-201ENST00000629326 BIVM-ERCC5R4GMW8 1640 aa14.23□□□□□ -0.13
NF1P9-201ENST00000629326 RAPGEF2Q9Y4G8 1499 aa14.23□□□□□ -0.13
NF1P9-201ENST00000629326 ERICH3Q5RHP9 1530 aa14.22□□□□□ -0.13
NF1P9-201ENST00000629326 APLP2Q06481 763 aa14.18□□□□□ -0.14
NF1P9-201ENST00000629326 GTF3C3Q9Y5Q9 886 aa14.17□□□□□ -0.14
NF1P9-201ENST00000629326 PRXQ9BXM0 1461 aa14.16□□□□□ -0.14
NF1P9-201ENST00000629326 CLSPNQ9HAW4 1339 aa14.15□□□□□ -0.14
NF1P9-201ENST00000629326 HMGXB3Q12766 1538 aa14.14□□□□□ -0.15
NF1P9-201ENST00000629326 HNRNPUL2Q1KMD3 747 aaKnown RBP14.14□□□□□ -0.15
NF1P9-201ENST00000629326 ARAP1Q96P48 1450 aa14.09□□□□□ -0.15
NF1P9-201ENST00000629326 NCAPD3P42695 1498 aa14.09□□□□□ -0.15
NF1P9-201ENST00000629326 CUX1P39880 1505 aa14.04□□□□□ -0.16
NF1P9-201ENST00000629326 KIF27Q86VH2 1401 aa14.04□□□□□ -0.16
NF1P9-201ENST00000629326 RRBP1Q9P2E9 1410 aaKnown RBP14.03□□□□□ -0.16
NF1P9-201ENST00000629326 DHX57Q6P158 1386 aaKnown RBP14.02□□□□□ -0.17
NF1P9-201ENST00000629326 MIER1Q8N108 512 aa14.02□□□□□ -0.17
NF1P9-201ENST00000629326 CUX2O14529 1486 aa14.01□□□□□ -0.17
NF1P9-201ENST00000629326 CFTRP13569 1480 aa14□□□□□ -0.17
NF1P9-201ENST00000629326 PRDM2Q13029 1718 aa13.95□□□□□ -0.18
NF1P9-201ENST00000629326 YTHDC1Q96MU7 727 aaKnown RBP13.94□□□□□ -0.18
NF1P9-201ENST00000629326 ARHGAP35Q9NRY4 1499 aa13.94□□□□□ -0.18
NF1P9-201ENST00000629326 RANGAP1P46060 587 aaPredicted RBP13.93□□□□□ -0.18
NF1P9-201ENST00000629326 MYT1Q01538 1121 aa13.93□□□□□ -0.18
NF1P9-201ENST00000629326 MAP3K1Q13233 1512 aa13.93□□□□□ -0.18
NF1P9-201ENST00000629326 KANK4Q5T7N3 995 aaPredicted RBP13.93□□□□□ -0.18
NF1P9-201ENST00000629326 CCNB3Q8WWL7 1395 aa13.91□□□□□ -0.18
NF1P9-201ENST00000629326 TIAM1Q13009 1591 aa13.85□□□□□ -0.19
NF1P9-201ENST00000629326 IGF1RP08069 1367 aa13.83□□□□□ -0.2
NF1P9-201ENST00000629326 CADPSQ9ULU8 1353 aa13.79□□□□□ -0.2
NF1P9-201ENST00000629326 FHAD1B1AJZ9 1412 aa13.79□□□□□ -0.2
NF1P9-201ENST00000629326 LRRC9Q6ZRR7 1453 aa13.78□□□□□ -0.2
NF1P9-201ENST00000629326 CARMIL1Q5VZK9 1371 aa13.78□□□□□ -0.2
NF1P9-201ENST00000629326 MAPKBP1O60336 1514 aa13.78□□□□□ -0.2
NF1P9-201ENST00000629326 RAB3GAP2Q9H2M9 1393 aa13.77□□□□□ -0.2
NF1P9-201ENST00000629326 CFAP43Q8NDM7 1665 aa13.77□□□□□ -0.21
NF1P9-201ENST00000629326 FGD5Q6ZNL6 1462 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms