RNA–Protein interactions for RNA: ENST00000424293.4

NPIPB10P-201, Transcript of nuclear pore complex interacting protein family, member B10, pseudogene, humanhuman

BASIC

Gene NPIPB10P, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB10P-201ENST00000424293 CHIC1Q5VXU3 224 aa24.08■■□□□ 1.45
NPIPB10P-201ENST00000424293 AEBP2Q6ZN18 517 aaPredicted RBP23.99■■□□□ 1.43
NPIPB10P-201ENST00000424293 NISCHQ9Y2I1 1504 aa21.69■■□□□ 1.06
NPIPB10P-201ENST00000424293 PHF23Q9BUL5 403 aaPredicted RBP21.23■□□□□ 0.99
NPIPB10P-201ENST00000424293 SENP3Q9H4L4 574 aaPredicted RBP20.31■□□□□ 0.84
NPIPB10P-201ENST00000424293 PLPPR3Q6T4P5 718 aa19.85■□□□□ 0.77
NPIPB10P-201ENST00000424293 CCDC180Q9P1Z9 1646 aa19.08■□□□□ 0.65
NPIPB10P-201ENST00000424293 FOXD1Q16676 465 aa18.74■□□□□ 0.59
NPIPB10P-201ENST00000424293 ADRA2BP18089 450 aa18.55■□□□□ 0.56
NPIPB10P-201ENST00000424293 ABCC9O60706 1549 aa18.53■□□□□ 0.56
NPIPB10P-201ENST00000424293 PPP6R1Q9UPN7 881 aa18.52■□□□□ 0.55
NPIPB10P-201ENST00000424293 DCAF8L2P0C7V8 631 aa18.17■□□□□ 0.5
NPIPB10P-201ENST00000424293 ZCCHC6Q5VYS8 1495 aaKnown RBP18.11■□□□□ 0.49
NPIPB10P-201ENST00000424293 NACADO15069 1562 aa17.89■□□□□ 0.45
NPIPB10P-201ENST00000424293 DCAF1Q9Y4B6 1507 aa17.88■□□□□ 0.45
NPIPB10P-201ENST00000424293 RB1CC1Q8TDY2 1594 aa17.85■□□□□ 0.45
NPIPB10P-201ENST00000424293 KCNA4P22459 653 aa17.85■□□□□ 0.45
NPIPB10P-201ENST00000424293 PIAS4Q8N2W9 510 aaPredicted RBP17.84■□□□□ 0.45
NPIPB10P-201ENST00000424293 MYO15BQ96JP2 1530 aa17.82■□□□□ 0.44
NPIPB10P-201ENST00000424293 PPP4R3CPQ6ZMV5 832 aa17.56■□□□□ 0.4
NPIPB10P-201ENST00000424293 SCRIBQ14160 1630 aa17.56■□□□□ 0.4
NPIPB10P-201ENST00000424293 UNC13AQ9UPW8 1703 aa17.53■□□□□ 0.4
NPIPB10P-201ENST00000424293 SHROOM4Q9ULL8 1493 aa17.47■□□□□ 0.39
NPIPB10P-201ENST00000424293 PABPN1Q86U42 306 aaKnown RBP eCLIP17.42■□□□□ 0.38
NPIPB10P-201ENST00000424293 EHMT2Q96KQ7 1210 aa17.36■□□□□ 0.37
NPIPB10P-201ENST00000424293 BICRAQ9NZM4 1560 aa17.35■□□□□ 0.37
NPIPB10P-201ENST00000424293 NCBP3Q53F19 620 aaKnown RBP17.32■□□□□ 0.36
NPIPB10P-201ENST00000424293 SLC4A1APQ9BWU0 796 aaKnown RBP17.14■□□□□ 0.33
NPIPB10P-201ENST00000424293 MSH5O43196 834 aa17.07■□□□□ 0.32
NPIPB10P-201ENST00000424293 SCAF1Q9H7N4 1312 aaKnown RBP17.03■□□□□ 0.32
NPIPB10P-201ENST00000424293 NPM3O75607 178 aaKnown RBP17.02■□□□□ 0.32
NPIPB10P-201ENST00000424293 CNKSR2Q8WXI2 1034 aa16.94■□□□□ 0.3
NPIPB10P-201ENST00000424293 CECR2Q9BXF3 1484 aa16.94■□□□□ 0.3
NPIPB10P-201ENST00000424293 CSRNP3Q8WYN3 585 aa16.88■□□□□ 0.29
NPIPB10P-201ENST00000424293 EIF4G1Q04637 1599 aaKnown RBP16.84■□□□□ 0.29
NPIPB10P-201ENST00000424293 DNAJC5BQ9UF47 199 aa16.8■□□□□ 0.28
NPIPB10P-201ENST00000424293 MROH2BQ7Z745 1585 aa16.77■□□□□ 0.28
NPIPB10P-201ENST00000424293 SMARCA4P51532 1647 aa16.76■□□□□ 0.27
NPIPB10P-201ENST00000424293 BAZ1AQ9NRL2 1556 aaPredicted RBP16.76■□□□□ 0.27
NPIPB10P-201ENST00000424293 CC2D2AQ9P2K1 1620 aa16.73■□□□□ 0.27
NPIPB10P-201ENST00000424293 RSF1Q96T23 1441 aaPredicted RBP16.67■□□□□ 0.26
NPIPB10P-201ENST00000424293 MAPK8IP2Q13387 824 aaPredicted RBP16.64■□□□□ 0.25
NPIPB10P-201ENST00000424293 WIZO95785 1651 aa16.62■□□□□ 0.25
NPIPB10P-201ENST00000424293 ATAD2BQ9ULI0 1458 aa16.61■□□□□ 0.25
NPIPB10P-201ENST00000424293 SUPT5HO00267 1087 aaKnown RBP16.6■□□□□ 0.25
NPIPB10P-201ENST00000424293 SMARCA2P51531 1590 aa16.56■□□□□ 0.24
NPIPB10P-201ENST00000424293 PEG3Q9GZU2 1588 aa16.54■□□□□ 0.24
NPIPB10P-201ENST00000424293 NCAPD3P42695 1498 aa16.52■□□□□ 0.24
NPIPB10P-201ENST00000424293 BAZ1BQ9UIG0 1483 aaKnown RBP16.48■□□□□ 0.23
NPIPB10P-201ENST00000424293 RNF216Q9NWF9 866 aaPredicted RBP16.45■□□□□ 0.22
NPIPB10P-201ENST00000424293 HMGXB3Q12766 1538 aa16.44■□□□□ 0.22
NPIPB10P-201ENST00000424293 ZBTB22O15209 634 aa16.41■□□□□ 0.22
NPIPB10P-201ENST00000424293 TOP2AP11388 1531 aaKnown RBP16.38■□□□□ 0.21
NPIPB10P-201ENST00000424293 DMRT2Q9Y5R5 561 aa16.29■□□□□ 0.2
NPIPB10P-201ENST00000424293 FOXD4L1Q9NU39 408 aa16.27■□□□□ 0.2
NPIPB10P-201ENST00000424293 CCDC88BA6NC98 1476 aa16.25■□□□□ 0.19
NPIPB10P-201ENST00000424293 HOXD11P31277 338 aaPredicted RBP16.21■□□□□ 0.19
NPIPB10P-201ENST00000424293 NESP48681 1621 aa16.14■□□□□ 0.17
NPIPB10P-201ENST00000424293 CADPSQ9ULU8 1353 aa16.09■□□□□ 0.17
NPIPB10P-201ENST00000424293 CFTRP13569 1480 aa16.03■□□□□ 0.16
NPIPB10P-201ENST00000424293 LAMC3Q9Y6N6 1575 aa16.03■□□□□ 0.16
NPIPB10P-201ENST00000424293 PRDM2Q13029 1718 aa15.94■□□□□ 0.14
NPIPB10P-201ENST00000424293 PDS5BQ9NTI5 1447 aa15.93■□□□□ 0.14
NPIPB10P-201ENST00000424293 KIF21AQ7Z4S6 1674 aa15.92■□□□□ 0.14
NPIPB10P-201ENST00000424293 FANCD2Q9BXW9 1451 aa15.91■□□□□ 0.14
NPIPB10P-201ENST00000424293 SLC4A2P04920 1241 aa15.9■□□□□ 0.14
NPIPB10P-201ENST00000424293 ERCC6Q03468 1493 aa15.9■□□□□ 0.14
NPIPB10P-201ENST00000424293 CEP164Q9UPV0 1460 aa15.84■□□□□ 0.13
NPIPB10P-201ENST00000424293 ABCC8Q09428 1581 aa15.78■□□□□ 0.12
NPIPB10P-201ENST00000424293 MRC2Q9UBG0 1479 aa15.75■□□□□ 0.11
NPIPB10P-201ENST00000424293 URB2Q14146 1524 aaKnown RBP15.75■□□□□ 0.11
NPIPB10P-201ENST00000424293 THOC2Q8NI27 1593 aaKnown RBP15.74■□□□□ 0.11
NPIPB10P-201ENST00000424293 MYCNP04198 464 aaPredicted RBP15.74■□□□□ 0.11
NPIPB10P-201ENST00000424293 CUX1P39880 1505 aa15.71■□□□□ 0.1
NPIPB10P-201ENST00000424293 TOPBP1Q92547 1522 aa15.69■□□□□ 0.1
NPIPB10P-201ENST00000424293 WRNQ14191 1432 aaPredicted RBP eCLIP15.69■□□□□ 0.1
NPIPB10P-201ENST00000424293 ATXN8OSP0DMR3 200 aa15.67■□□□□ 0.1
NPIPB10P-201ENST00000424293 DNMBPQ6XZF7 1577 aa15.67■□□□□ 0.1
NPIPB10P-201ENST00000424293 WDR62O43379 1518 aa15.66■□□□□ 0.1
NPIPB10P-201ENST00000424293 SYNJ1O43426 1573 aa15.66■□□□□ 0.1
NPIPB10P-201ENST00000424293 DNAJC5Q9H3Z4 198 aa15.62■□□□□ 0.09
NPIPB10P-201ENST00000424293 TOP2BQ02880 1626 aa15.61■□□□□ 0.09
NPIPB10P-201ENST00000424293 TRIM41Q8WV44 630 aa15.61■□□□□ 0.09
NPIPB10P-201ENST00000424293 BIVM-ERCC5R4GMW8 1640 aa15.6■□□□□ 0.09
NPIPB10P-201ENST00000424293 FGD5Q6ZNL6 1462 aa15.59■□□□□ 0.09
NPIPB10P-201ENST00000424293 DCAF8L1A6NGE4 600 aa15.58■□□□□ 0.08
NPIPB10P-201ENST00000424293 POLA1P09884 1462 aaPredicted RBP15.57■□□□□ 0.08
NPIPB10P-201ENST00000424293 CUX2O14529 1486 aa15.57■□□□□ 0.08
NPIPB10P-201ENST00000424293 RAD54L2Q9Y4B4 1467 aa15.57■□□□□ 0.08
NPIPB10P-201ENST00000424293 SOGA1O94964 1423 aa15.54■□□□□ 0.08
NPIPB10P-201ENST00000424293 TARBP1Q13395 1621 aaKnown RBP15.48■□□□□ 0.07
NPIPB10P-201ENST00000424293 IFT140Q96RY7 1462 aa15.48■□□□□ 0.07
NPIPB10P-201ENST00000424293 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.48■□□□□ 0.07
NPIPB10P-201ENST00000424293 ZNF608Q9ULD9 1512 aaPredicted RBP15.47■□□□□ 0.07
NPIPB10P-201ENST00000424293 TDRD9Q8NDG6 1382 aaKnown RBP15.45■□□□□ 0.06
NPIPB10P-201ENST00000424293 AQRO60306 1485 aaKnown RBP eCLIP15.43■□□□□ 0.06
NPIPB10P-201ENST00000424293 ABCA10Q8WWZ4 1543 aa15.42■□□□□ 0.06
NPIPB10P-201ENST00000424293 WDR97A6NE52 1622 aa15.42■□□□□ 0.06
NPIPB10P-201ENST00000424293 RUSC2Q8N2Y8 1516 aa15.39■□□□□ 0.05
NPIPB10P-201ENST00000424293 EIF4G3O43432 1585 aaKnown RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms