RNA–Protein interactions for RNA: ENST00000605910.1

TRAM2-AS1-202, Transcript of TRAM2 antisense RNA 1 (head to head), humanhuman

TSL 3 BASIC

Gene TRAM2-AS1, Length 1,053 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM2-AS1-202ENST00000605910 AEBP2Q6ZN18 517 aaPredicted RBP25.32■■□□□ 1.64
TRAM2-AS1-202ENST00000605910 CHIC1Q5VXU3 224 aa24.64■■□□□ 1.54
TRAM2-AS1-202ENST00000605910 POTEDQ86YR6 584 aa22.05■■□□□ 1.12
TRAM2-AS1-202ENST00000605910 NISCHQ9Y2I1 1504 aa21.85■■□□□ 1.09
TRAM2-AS1-202ENST00000605910 PHF23Q9BUL5 403 aaPredicted RBP21.61■■□□□ 1.05
TRAM2-AS1-202ENST00000605910 SENP3Q9H4L4 574 aaPredicted RBP21.58■■□□□ 1.05
TRAM2-AS1-202ENST00000605910 FOXD1Q16676 465 aa20.04■□□□□ 0.8
TRAM2-AS1-202ENST00000605910 PLPPR3Q6T4P5 718 aa19.98■□□□□ 0.79
TRAM2-AS1-202ENST00000605910 ABCC9O60706 1549 aa19.43■□□□□ 0.7
TRAM2-AS1-202ENST00000605910 CCDC180Q9P1Z9 1646 aa19.4■□□□□ 0.7
TRAM2-AS1-202ENST00000605910 MSH5O43196 834 aa19.36■□□□□ 0.69
TRAM2-AS1-202ENST00000605910 ADRA2BP18089 450 aa19.14■□□□□ 0.65
TRAM2-AS1-202ENST00000605910 PPP6R1Q9UPN7 881 aa19.12■□□□□ 0.65
TRAM2-AS1-202ENST00000605910 PIAS4Q8N2W9 510 aaPredicted RBP18.89■□□□□ 0.61
TRAM2-AS1-202ENST00000605910 DNAJC5BQ9UF47 199 aa18.8■□□□□ 0.6
TRAM2-AS1-202ENST00000605910 RB1CC1Q8TDY2 1594 aa18.26■□□□□ 0.51
TRAM2-AS1-202ENST00000605910 NACADO15069 1562 aa18.24■□□□□ 0.51
TRAM2-AS1-202ENST00000605910 DCAF8L2P0C7V8 631 aa18.22■□□□□ 0.51
TRAM2-AS1-202ENST00000605910 ZCCHC6Q5VYS8 1495 aaKnown RBP18.21■□□□□ 0.51
TRAM2-AS1-202ENST00000605910 MYO15BQ96JP2 1530 aa18.19■□□□□ 0.5
TRAM2-AS1-202ENST00000605910 DCAF1Q9Y4B6 1507 aa18.14■□□□□ 0.49
TRAM2-AS1-202ENST00000605910 PABPN1Q86U42 306 aaKnown RBP eCLIP18.08■□□□□ 0.48
TRAM2-AS1-202ENST00000605910 BICRAQ9NZM4 1560 aa17.8■□□□□ 0.44
TRAM2-AS1-202ENST00000605910 UNC13AQ9UPW8 1703 aa17.78■□□□□ 0.44
TRAM2-AS1-202ENST00000605910 CACNB1Q02641 598 aaPredicted RBP17.76■□□□□ 0.43
TRAM2-AS1-202ENST00000605910 SCRIBQ14160 1630 aa17.63■□□□□ 0.41
TRAM2-AS1-202ENST00000605910 DNAJC5Q9H3Z4 198 aa17.6■□□□□ 0.41
TRAM2-AS1-202ENST00000605910 PPP4R3CPQ6ZMV5 832 aa17.58■□□□□ 0.4
TRAM2-AS1-202ENST00000605910 CECR2Q9BXF3 1484 aa17.57■□□□□ 0.4
TRAM2-AS1-202ENST00000605910 SCAF1Q9H7N4 1312 aaKnown RBP17.56■□□□□ 0.4
TRAM2-AS1-202ENST00000605910 SHROOM4Q9ULL8 1493 aa17.53■□□□□ 0.4
TRAM2-AS1-202ENST00000605910 CC2D2AQ9P2K1 1620 aa17.51■□□□□ 0.39
TRAM2-AS1-202ENST00000605910 MAPK8IP2Q13387 824 aaPredicted RBP17.39■□□□□ 0.37
TRAM2-AS1-202ENST00000605910 EIF4G1Q04637 1599 aaKnown RBP17.37■□□□□ 0.37
TRAM2-AS1-202ENST00000605910 DMRT2Q9Y5R5 561 aa17.17■□□□□ 0.34
TRAM2-AS1-202ENST00000605910 NCBP3Q53F19 620 aaKnown RBP17.12■□□□□ 0.33
TRAM2-AS1-202ENST00000605910 CNKSR2Q8WXI2 1034 aa17.12■□□□□ 0.33
TRAM2-AS1-202ENST00000605910 KCNA4P22459 653 aa17■□□□□ 0.31
TRAM2-AS1-202ENST00000605910 CUX2O14529 1486 aa16.96■□□□□ 0.31
TRAM2-AS1-202ENST00000605910 BAZ1AQ9NRL2 1556 aaPredicted RBP16.96■□□□□ 0.31
TRAM2-AS1-202ENST00000605910 SMARCA4P51532 1647 aa16.91■□□□□ 0.3
TRAM2-AS1-202ENST00000605910 POTEHQ6S545 545 aa16.9■□□□□ 0.3
TRAM2-AS1-202ENST00000605910 SMARCA2P51531 1590 aa16.83■□□□□ 0.28
TRAM2-AS1-202ENST00000605910 NCAPD3P42695 1498 aa16.82■□□□□ 0.28
TRAM2-AS1-202ENST00000605910 NPM3O75607 178 aaKnown RBP16.81■□□□□ 0.28
TRAM2-AS1-202ENST00000605910 ATAD2BQ9ULI0 1458 aa16.8■□□□□ 0.28
TRAM2-AS1-202ENST00000605910 RNF216Q9NWF9 866 aaPredicted RBP16.8■□□□□ 0.28
TRAM2-AS1-202ENST00000605910 MROH2BQ7Z745 1585 aa16.8■□□□□ 0.28
TRAM2-AS1-202ENST00000605910 PEG3Q9GZU2 1588 aa16.78■□□□□ 0.28
TRAM2-AS1-202ENST00000605910 ERCC6Q03468 1493 aa16.78■□□□□ 0.28
TRAM2-AS1-202ENST00000605910 HOXD11P31277 338 aaPredicted RBP16.74■□□□□ 0.27
TRAM2-AS1-202ENST00000605910 HMGXB3Q12766 1538 aa16.73■□□□□ 0.27
TRAM2-AS1-202ENST00000605910 BAZ1BQ9UIG0 1483 aaKnown RBP16.68■□□□□ 0.26
TRAM2-AS1-202ENST00000605910 RSF1Q96T23 1441 aaPredicted RBP16.68■□□□□ 0.26
TRAM2-AS1-202ENST00000605910 WIZO95785 1651 aa16.62■□□□□ 0.25
TRAM2-AS1-202ENST00000605910 NESP48681 1621 aa16.57■□□□□ 0.24
TRAM2-AS1-202ENST00000605910 DCAF8L1A6NGE4 600 aa16.56■□□□□ 0.24
TRAM2-AS1-202ENST00000605910 EHMT2Q96KQ7 1210 aa16.56■□□□□ 0.24
TRAM2-AS1-202ENST00000605910 TRIM41Q8WV44 630 aa16.52■□□□□ 0.24
TRAM2-AS1-202ENST00000605910 TOP2AP11388 1531 aaKnown RBP16.5■□□□□ 0.23
TRAM2-AS1-202ENST00000605910 THOC2Q8NI27 1593 aaKnown RBP16.44■□□□□ 0.22
TRAM2-AS1-202ENST00000605910 RNF39Q9H2S5 420 aa16.39■□□□□ 0.21
TRAM2-AS1-202ENST00000605910 LAMC3Q9Y6N6 1575 aa16.36■□□□□ 0.21
TRAM2-AS1-202ENST00000605910 SUPT5HO00267 1087 aaKnown RBP16.34■□□□□ 0.21
TRAM2-AS1-202ENST00000605910 CADPSQ9ULU8 1353 aa16.33■□□□□ 0.2
TRAM2-AS1-202ENST00000605910 PDS5BQ9NTI5 1447 aa16.33■□□□□ 0.2
TRAM2-AS1-202ENST00000605910 CCDC88BA6NC98 1476 aa16.29■□□□□ 0.2
TRAM2-AS1-202ENST00000605910 KIF21AQ7Z4S6 1674 aa16.24■□□□□ 0.19
TRAM2-AS1-202ENST00000605910 CFTRP13569 1480 aa16.24■□□□□ 0.19
TRAM2-AS1-202ENST00000605910 SLC4A1APQ9BWU0 796 aaKnown RBP16.2■□□□□ 0.18
TRAM2-AS1-202ENST00000605910 OSCARQ8IYS5 282 aa16.19■□□□□ 0.18
TRAM2-AS1-202ENST00000605910 MRC2Q9UBG0 1479 aa16.18■□□□□ 0.18
TRAM2-AS1-202ENST00000605910 WDR62O43379 1518 aa16.15■□□□□ 0.18
TRAM2-AS1-202ENST00000605910 PRDM2Q13029 1718 aa16.11■□□□□ 0.17
TRAM2-AS1-202ENST00000605910 FANCD2Q9BXW9 1451 aa16.11■□□□□ 0.17
TRAM2-AS1-202ENST00000605910 CEP164Q9UPV0 1460 aa16.1■□□□□ 0.17
TRAM2-AS1-202ENST00000605910 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.05■□□□□ 0.16
TRAM2-AS1-202ENST00000605910 C1QBPQ07021 282 aaKnown RBP16■□□□□ 0.15
TRAM2-AS1-202ENST00000605910 ABCC8Q09428 1581 aa15.96■□□□□ 0.15
TRAM2-AS1-202ENST00000605910 URB2Q14146 1524 aaKnown RBP15.9■□□□□ 0.14
TRAM2-AS1-202ENST00000605910 RIMBP3CA6NJZ7 1639 aa15.9■□□□□ 0.14
TRAM2-AS1-202ENST00000605910 RIMBP3BA6NNM3 1639 aa15.9■□□□□ 0.14
TRAM2-AS1-202ENST00000605910 RIMBP3Q9UFD9 1639 aa15.9■□□□□ 0.14
TRAM2-AS1-202ENST00000605910 SLC4A2P04920 1241 aa15.88■□□□□ 0.13
TRAM2-AS1-202ENST00000605910 TOPBP1Q92547 1522 aa15.86■□□□□ 0.13
TRAM2-AS1-202ENST00000605910 DNMBPQ6XZF7 1577 aa15.86■□□□□ 0.13
TRAM2-AS1-202ENST00000605910 ARHGEF11O15085 1522 aa15.84■□□□□ 0.13
TRAM2-AS1-202ENST00000605910 CYB5RLQ6IPT4 315 aa15.81■□□□□ 0.12
TRAM2-AS1-202ENST00000605910 ZNF608Q9ULD9 1512 aaPredicted RBP15.77■□□□□ 0.11
TRAM2-AS1-202ENST00000605910 IFT140Q96RY7 1462 aa15.77■□□□□ 0.11
TRAM2-AS1-202ENST00000605910 CUX1P39880 1505 aa15.75■□□□□ 0.11
TRAM2-AS1-202ENST00000605910 WRNQ14191 1432 aaPredicted RBP eCLIP15.75■□□□□ 0.11
TRAM2-AS1-202ENST00000605910 TRHP20396 242 aaPredicted RBP15.74■□□□□ 0.11
TRAM2-AS1-202ENST00000605910 CSRNP3Q8WYN3 585 aa15.74■□□□□ 0.11
TRAM2-AS1-202ENST00000605910 POLA1P09884 1462 aaPredicted RBP15.72■□□□□ 0.11
TRAM2-AS1-202ENST00000605910 FOXD4L1Q9NU39 408 aa15.72■□□□□ 0.11
TRAM2-AS1-202ENST00000605910 SOGA1O94964 1423 aa15.71■□□□□ 0.11
TRAM2-AS1-202ENST00000605910 U3KPZ7 1027 aaPredicted RBP15.71■□□□□ 0.11
TRAM2-AS1-202ENST00000605910 FGD5Q6ZNL6 1462 aa15.7■□□□□ 0.1
TRAM2-AS1-202ENST00000605910 TOP2BQ02880 1626 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms