Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HRH3Q9Y5N1 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.92■□□□□ 0.62
HRH3Q9Y5N1 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
HRH3Q9Y5N1 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HRH3Q9Y5N1 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.92■□□□□ 0.62
HRH3Q9Y5N1 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.92■□□□□ 0.62
HRH3Q9Y5N1 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HRH3Q9Y5N1 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HRH3Q9Y5N1 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
HRH3Q9Y5N1 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
HRH3Q9Y5N1 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HRH3Q9Y5N1 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
HRH3Q9Y5N1 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
HRH3Q9Y5N1 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
HRH3Q9Y5N1 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HRH3Q9Y5N1 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
HRH3Q9Y5N1 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HRH3Q9Y5N1 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
HRH3Q9Y5N1 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HRH3Q9Y5N1 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.91■□□□□ 0.62
HRH3Q9Y5N1 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
HRH3Q9Y5N1 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
HRH3Q9Y5N1 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.91■□□□□ 0.62
HRH3Q9Y5N1 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HRH3Q9Y5N1 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HRH3Q9Y5N1 MIPEPP3-201ENST00000412105 444 ntBASIC18.91■□□□□ 0.62
HRH3Q9Y5N1 AC093787.1-201ENST00000450396 207 ntBASIC18.91■□□□□ 0.62
HRH3Q9Y5N1 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.91■□□□□ 0.62
HRH3Q9Y5N1 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
HRH3Q9Y5N1 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HRH3Q9Y5N1 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HRH3Q9Y5N1 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HRH3Q9Y5N1 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HRH3Q9Y5N1 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HRH3Q9Y5N1 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HRH3Q9Y5N1 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HRH3Q9Y5N1 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.9■□□□□ 0.62
HRH3Q9Y5N1 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HRH3Q9Y5N1 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.9■□□□□ 0.62
HRH3Q9Y5N1 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HRH3Q9Y5N1 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HRH3Q9Y5N1 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.9■□□□□ 0.62
HRH3Q9Y5N1 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.9■□□□□ 0.62
HRH3Q9Y5N1 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HRH3Q9Y5N1 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.9■□□□□ 0.62
HRH3Q9Y5N1 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.9■□□□□ 0.62
HRH3Q9Y5N1 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
HRH3Q9Y5N1 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.9■□□□□ 0.62
HRH3Q9Y5N1 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HRH3Q9Y5N1 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.9■□□□□ 0.62
HRH3Q9Y5N1 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
HRH3Q9Y5N1 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HRH3Q9Y5N1 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
HRH3Q9Y5N1 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.9■□□□□ 0.62
HRH3Q9Y5N1 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HRH3Q9Y5N1 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HRH3Q9Y5N1 AL137060.1-201ENST00000618151 2648 ntBASIC18.89■□□□□ 0.62
HRH3Q9Y5N1 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.62
HRH3Q9Y5N1 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.89■□□□□ 0.61
HRH3Q9Y5N1 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HRH3Q9Y5N1 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
HRH3Q9Y5N1 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HRH3Q9Y5N1 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
HRH3Q9Y5N1 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
HRH3Q9Y5N1 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HRH3Q9Y5N1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.89■□□□□ 0.61
HRH3Q9Y5N1 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.89■□□□□ 0.61
HRH3Q9Y5N1 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.89■□□□□ 0.61
HRH3Q9Y5N1 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HRH3Q9Y5N1 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HRH3Q9Y5N1 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
HRH3Q9Y5N1 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
HRH3Q9Y5N1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.89■□□□□ 0.61
HRH3Q9Y5N1 AL049796.1-201ENST00000565336 1766 ntBASIC18.88■□□□□ 0.61
HRH3Q9Y5N1 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HRH3Q9Y5N1 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
HRH3Q9Y5N1 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
HRH3Q9Y5N1 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.88■□□□□ 0.61
HRH3Q9Y5N1 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.88■□□□□ 0.61
HRH3Q9Y5N1 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HRH3Q9Y5N1 MKRN4P-201ENST00000444706 1521 ntBASIC18.88■□□□□ 0.61
HRH3Q9Y5N1 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HRH3Q9Y5N1 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.88■□□□□ 0.61
HRH3Q9Y5N1 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
HRH3Q9Y5N1 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HRH3Q9Y5N1 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
HRH3Q9Y5N1 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HRH3Q9Y5N1 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HRH3Q9Y5N1 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.88■□□□□ 0.61
HRH3Q9Y5N1 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HRH3Q9Y5N1 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HRH3Q9Y5N1 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.87■□□□□ 0.61
HRH3Q9Y5N1 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HRH3Q9Y5N1 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HRH3Q9Y5N1 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HRH3Q9Y5N1 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
HRH3Q9Y5N1 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.87■□□□□ 0.61
HRH3Q9Y5N1 OR10C1-204ENST00000622521 1039 ntBASIC18.87■□□□□ 0.61
HRH3Q9Y5N1 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.87■□□□□ 0.61
HRH3Q9Y5N1 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms