Protein–RNA interactions for Protein: Q9Y3B2

EXOSC1, Exosome complex component CSL4, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1Q9Y3B2 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
EXOSC1Q9Y3B2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.33■□□□□ 0.52
EXOSC1Q9Y3B2 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.33■□□□□ 0.52
EXOSC1Q9Y3B2 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC18.33■□□□□ 0.52
EXOSC1Q9Y3B2 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.33■□□□□ 0.52
EXOSC1Q9Y3B2 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
EXOSC1Q9Y3B2 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.33■□□□□ 0.52
EXOSC1Q9Y3B2 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.33■□□□□ 0.52
EXOSC1Q9Y3B2 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
EXOSC1Q9Y3B2 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
EXOSC1Q9Y3B2 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EXOSC1Q9Y3B2 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.33■□□□□ 0.52
EXOSC1Q9Y3B2 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
EXOSC1Q9Y3B2 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.32■□□□□ 0.52
EXOSC1Q9Y3B2 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
EXOSC1Q9Y3B2 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
EXOSC1Q9Y3B2 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.32■□□□□ 0.52
EXOSC1Q9Y3B2 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
EXOSC1Q9Y3B2 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EXOSC1Q9Y3B2 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
EXOSC1Q9Y3B2 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
EXOSC1Q9Y3B2 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.32■□□□□ 0.52
EXOSC1Q9Y3B2 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
EXOSC1Q9Y3B2 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EXOSC1Q9Y3B2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
EXOSC1Q9Y3B2 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EXOSC1Q9Y3B2 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
EXOSC1Q9Y3B2 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
EXOSC1Q9Y3B2 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.32■□□□□ 0.52
EXOSC1Q9Y3B2 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
EXOSC1Q9Y3B2 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.31■□□□□ 0.52
EXOSC1Q9Y3B2 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EXOSC1Q9Y3B2 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
EXOSC1Q9Y3B2 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.31■□□□□ 0.52
EXOSC1Q9Y3B2 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
EXOSC1Q9Y3B2 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
EXOSC1Q9Y3B2 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EXOSC1Q9Y3B2 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.31■□□□□ 0.52
EXOSC1Q9Y3B2 AC133561.4-201ENST00000566112 224 ntBASIC18.31■□□□□ 0.52
EXOSC1Q9Y3B2 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
EXOSC1Q9Y3B2 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.31■□□□□ 0.52
EXOSC1Q9Y3B2 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
EXOSC1Q9Y3B2 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
EXOSC1Q9Y3B2 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
EXOSC1Q9Y3B2 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
EXOSC1Q9Y3B2 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
EXOSC1Q9Y3B2 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.31■□□□□ 0.52
EXOSC1Q9Y3B2 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
EXOSC1Q9Y3B2 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
EXOSC1Q9Y3B2 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EXOSC1Q9Y3B2 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EXOSC1Q9Y3B2 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EXOSC1Q9Y3B2 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
EXOSC1Q9Y3B2 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EXOSC1Q9Y3B2 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.3■□□□□ 0.52
EXOSC1Q9Y3B2 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
EXOSC1Q9Y3B2 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.3■□□□□ 0.52
EXOSC1Q9Y3B2 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
EXOSC1Q9Y3B2 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
EXOSC1Q9Y3B2 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EXOSC1Q9Y3B2 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
EXOSC1Q9Y3B2 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
EXOSC1Q9Y3B2 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
EXOSC1Q9Y3B2 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
EXOSC1Q9Y3B2 AP004607.4-201ENST00000530158 1459 ntBASIC18.3■□□□□ 0.52
EXOSC1Q9Y3B2 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
EXOSC1Q9Y3B2 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
EXOSC1Q9Y3B2 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.3■□□□□ 0.52
EXOSC1Q9Y3B2 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.3■□□□□ 0.52
EXOSC1Q9Y3B2 AC116562.4-201ENST00000641316 2276 ntBASIC18.3■□□□□ 0.52
EXOSC1Q9Y3B2 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.3■□□□□ 0.52
EXOSC1Q9Y3B2 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
EXOSC1Q9Y3B2 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
EXOSC1Q9Y3B2 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.3■□□□□ 0.52
EXOSC1Q9Y3B2 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EXOSC1Q9Y3B2 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EXOSC1Q9Y3B2 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.29■□□□□ 0.52
EXOSC1Q9Y3B2 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
EXOSC1Q9Y3B2 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EXOSC1Q9Y3B2 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.29■□□□□ 0.52
EXOSC1Q9Y3B2 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
EXOSC1Q9Y3B2 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.29■□□□□ 0.52
EXOSC1Q9Y3B2 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.29■□□□□ 0.52
EXOSC1Q9Y3B2 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EXOSC1Q9Y3B2 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EXOSC1Q9Y3B2 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.29■□□□□ 0.52
EXOSC1Q9Y3B2 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.29■□□□□ 0.52
EXOSC1Q9Y3B2 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EXOSC1Q9Y3B2 AL020996.1-203ENST00000536896 2307 ntBASIC18.29■□□□□ 0.52
EXOSC1Q9Y3B2 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EXOSC1Q9Y3B2 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EXOSC1Q9Y3B2 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
EXOSC1Q9Y3B2 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
EXOSC1Q9Y3B2 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
EXOSC1Q9Y3B2 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.28■□□□□ 0.52
EXOSC1Q9Y3B2 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.28■□□□□ 0.52
EXOSC1Q9Y3B2 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EXOSC1Q9Y3B2 AC005224.4-201ENST00000583262 1652 ntBASIC18.28■□□□□ 0.52
EXOSC1Q9Y3B2 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.28■□□□□ 0.52
EXOSC1Q9Y3B2 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms