Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RCL1Q9Y2P8 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RCL1Q9Y2P8 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RCL1Q9Y2P8 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.74■□□□□ 0.27
RCL1Q9Y2P8 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC16.74■□□□□ 0.27
RCL1Q9Y2P8 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RCL1Q9Y2P8 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.74■□□□□ 0.27
RCL1Q9Y2P8 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RCL1Q9Y2P8 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RCL1Q9Y2P8 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.73■□□□□ 0.27
RCL1Q9Y2P8 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RCL1Q9Y2P8 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RCL1Q9Y2P8 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RCL1Q9Y2P8 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RCL1Q9Y2P8 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RCL1Q9Y2P8 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RCL1Q9Y2P8 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RCL1Q9Y2P8 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RCL1Q9Y2P8 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RCL1Q9Y2P8 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RCL1Q9Y2P8 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RCL1Q9Y2P8 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.73■□□□□ 0.27
RCL1Q9Y2P8 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
RCL1Q9Y2P8 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RCL1Q9Y2P8 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
RCL1Q9Y2P8 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RCL1Q9Y2P8 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RCL1Q9Y2P8 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RCL1Q9Y2P8 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RCL1Q9Y2P8 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RCL1Q9Y2P8 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RCL1Q9Y2P8 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.72■□□□□ 0.27
RCL1Q9Y2P8 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.72■□□□□ 0.27
RCL1Q9Y2P8 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RCL1Q9Y2P8 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
RCL1Q9Y2P8 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC16.72■□□□□ 0.27
RCL1Q9Y2P8 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC16.72■□□□□ 0.27
RCL1Q9Y2P8 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.72■□□□□ 0.27
RCL1Q9Y2P8 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RCL1Q9Y2P8 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RCL1Q9Y2P8 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
RCL1Q9Y2P8 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RCL1Q9Y2P8 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RCL1Q9Y2P8 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RCL1Q9Y2P8 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RCL1Q9Y2P8 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RCL1Q9Y2P8 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.71■□□□□ 0.27
RCL1Q9Y2P8 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RCL1Q9Y2P8 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
RCL1Q9Y2P8 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC16.71■□□□□ 0.27
RCL1Q9Y2P8 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
RCL1Q9Y2P8 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RCL1Q9Y2P8 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RCL1Q9Y2P8 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RCL1Q9Y2P8 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RCL1Q9Y2P8 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC16.71■□□□□ 0.27
RCL1Q9Y2P8 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
RCL1Q9Y2P8 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RCL1Q9Y2P8 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RCL1Q9Y2P8 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RCL1Q9Y2P8 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RCL1Q9Y2P8 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RCL1Q9Y2P8 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RCL1Q9Y2P8 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
RCL1Q9Y2P8 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
RCL1Q9Y2P8 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RCL1Q9Y2P8 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
RCL1Q9Y2P8 BX005040.4-201ENST00000637145 1518 ntBASIC16.7■□□□□ 0.26
RCL1Q9Y2P8 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RCL1Q9Y2P8 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RCL1Q9Y2P8 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RCL1Q9Y2P8 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
RCL1Q9Y2P8 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RCL1Q9Y2P8 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RCL1Q9Y2P8 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RCL1Q9Y2P8 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RCL1Q9Y2P8 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RCL1Q9Y2P8 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RCL1Q9Y2P8 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.7■□□□□ 0.26
RCL1Q9Y2P8 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RCL1Q9Y2P8 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
RCL1Q9Y2P8 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RCL1Q9Y2P8 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RCL1Q9Y2P8 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.7■□□□□ 0.26
RCL1Q9Y2P8 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RCL1Q9Y2P8 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RCL1Q9Y2P8 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC16.7■□□□□ 0.26
RCL1Q9Y2P8 AK3-203ENST00000447596 705 ntTSL 2 BASIC16.7■□□□□ 0.26
RCL1Q9Y2P8 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC16.7■□□□□ 0.26
RCL1Q9Y2P8 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC16.7■□□□□ 0.26
RCL1Q9Y2P8 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RCL1Q9Y2P8 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RCL1Q9Y2P8 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
RCL1Q9Y2P8 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RCL1Q9Y2P8 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RCL1Q9Y2P8 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.7■□□□□ 0.26
RCL1Q9Y2P8 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RCL1Q9Y2P8 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RCL1Q9Y2P8 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RCL1Q9Y2P8 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms