Protein–RNA interactions for Protein: Q9UQR0

SCML2, Sex comb on midleg-like protein 2, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML2Q9UQR0 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SCML2Q9UQR0 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SCML2Q9UQR0 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SCML2Q9UQR0 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SCML2Q9UQR0 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.42■■□□□ 1.02
SCML2Q9UQR0 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.42■■□□□ 1.02
SCML2Q9UQR0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SCML2Q9UQR0 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.42■■□□□ 1.02
SCML2Q9UQR0 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SCML2Q9UQR0 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.42■■□□□ 1.02
SCML2Q9UQR0 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.42■■□□□ 1.02
SCML2Q9UQR0 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SCML2Q9UQR0 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SCML2Q9UQR0 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SCML2Q9UQR0 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SCML2Q9UQR0 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SCML2Q9UQR0 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SCML2Q9UQR0 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SCML2Q9UQR0 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.41■■□□□ 1.02
SCML2Q9UQR0 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.41■■□□□ 1.02
SCML2Q9UQR0 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SCML2Q9UQR0 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SCML2Q9UQR0 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.41■■□□□ 1.02
SCML2Q9UQR0 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SCML2Q9UQR0 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.41■■□□□ 1.02
SCML2Q9UQR0 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
SCML2Q9UQR0 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SCML2Q9UQR0 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.41■■□□□ 1.02
SCML2Q9UQR0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
SCML2Q9UQR0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
SCML2Q9UQR0 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SCML2Q9UQR0 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.4■■□□□ 1.02
SCML2Q9UQR0 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.4■■□□□ 1.02
SCML2Q9UQR0 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SCML2Q9UQR0 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
SCML2Q9UQR0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SCML2Q9UQR0 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.4■■□□□ 1.02
SCML2Q9UQR0 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.4■■□□□ 1.02
SCML2Q9UQR0 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SCML2Q9UQR0 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.4■■□□□ 1.02
SCML2Q9UQR0 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
SCML2Q9UQR0 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
SCML2Q9UQR0 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SCML2Q9UQR0 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.39■■□□□ 1.01
SCML2Q9UQR0 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.39■■□□□ 1.01
SCML2Q9UQR0 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SCML2Q9UQR0 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.39■■□□□ 1.01
SCML2Q9UQR0 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SCML2Q9UQR0 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SCML2Q9UQR0 RNA5SP413-201ENST00000516373 109 ntBASIC21.39■■□□□ 1.01
SCML2Q9UQR0 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.39■■□□□ 1.01
SCML2Q9UQR0 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.39■■□□□ 1.01
SCML2Q9UQR0 MIR2861-201ENST00000636310 90 ntBASIC21.39■■□□□ 1.01
SCML2Q9UQR0 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.39■■□□□ 1.01
SCML2Q9UQR0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
SCML2Q9UQR0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SCML2Q9UQR0 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SCML2Q9UQR0 PLK5-205ENST00000642079 1969 ntBASIC21.39■■□□□ 1.01
SCML2Q9UQR0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SCML2Q9UQR0 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SCML2Q9UQR0 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
SCML2Q9UQR0 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
SCML2Q9UQR0 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.38■■□□□ 1.01
SCML2Q9UQR0 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SCML2Q9UQR0 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.38■■□□□ 1.01
SCML2Q9UQR0 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SCML2Q9UQR0 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
SCML2Q9UQR0 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SCML2Q9UQR0 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.38■■□□□ 1.01
SCML2Q9UQR0 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.38■■□□□ 1.01
SCML2Q9UQR0 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
SCML2Q9UQR0 C2orf69P4-201ENST00000565394 541 ntBASIC21.38■■□□□ 1.01
SCML2Q9UQR0 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.38■■□□□ 1.01
SCML2Q9UQR0 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.38■■□□□ 1.01
SCML2Q9UQR0 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SCML2Q9UQR0 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
SCML2Q9UQR0 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SCML2Q9UQR0 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
SCML2Q9UQR0 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SCML2Q9UQR0 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SCML2Q9UQR0 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SCML2Q9UQR0 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SCML2Q9UQR0 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SCML2Q9UQR0 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.37■■□□□ 1.01
SCML2Q9UQR0 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
SCML2Q9UQR0 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SCML2Q9UQR0 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.37■■□□□ 1.01
SCML2Q9UQR0 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
SCML2Q9UQR0 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SCML2Q9UQR0 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.37■■□□□ 1.01
SCML2Q9UQR0 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.37■■□□□ 1.01
SCML2Q9UQR0 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.37■■□□□ 1.01
SCML2Q9UQR0 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SCML2Q9UQR0 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SCML2Q9UQR0 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SCML2Q9UQR0 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SCML2Q9UQR0 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.36■■□□□ 1.01
SCML2Q9UQR0 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.36■■□□□ 1.01
SCML2Q9UQR0 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SCML2Q9UQR0 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms