Protein–RNA interactions for Protein: Q9UKN5

PRDM4, PR domain zinc finger protein 4, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4Q9UKN5 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.16■□□□□ 0.98
PRDM4Q9UKN5 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRDM4Q9UKN5 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PRDM4Q9UKN5 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PRDM4Q9UKN5 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.16■□□□□ 0.98
PRDM4Q9UKN5 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
PRDM4Q9UKN5 DUX4L18-201ENST00000553347 1267 ntBASIC21.16■□□□□ 0.98
PRDM4Q9UKN5 BHLHE23-202ENST00000612929 1109 ntBASIC21.16■□□□□ 0.98
PRDM4Q9UKN5 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PRDM4Q9UKN5 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRDM4Q9UKN5 AC084018.2-201ENST00000613093 2607 ntBASIC21.16■□□□□ 0.98
PRDM4Q9UKN5 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC21.16■□□□□ 0.98
PRDM4Q9UKN5 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRDM4Q9UKN5 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRDM4Q9UKN5 AC135050.7-201ENST00000624508 2218 ntBASIC21.16■□□□□ 0.98
PRDM4Q9UKN5 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRDM4Q9UKN5 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC21.16■□□□□ 0.98
PRDM4Q9UKN5 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
PRDM4Q9UKN5 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRDM4Q9UKN5 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRDM4Q9UKN5 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.15■□□□□ 0.98
PRDM4Q9UKN5 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRDM4Q9UKN5 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRDM4Q9UKN5 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.15■□□□□ 0.98
PRDM4Q9UKN5 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRDM4Q9UKN5 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PRDM4Q9UKN5 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.15■□□□□ 0.98
PRDM4Q9UKN5 MIR4508-201ENST00000584178 70 ntBASIC21.15■□□□□ 0.98
PRDM4Q9UKN5 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
PRDM4Q9UKN5 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRDM4Q9UKN5 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRDM4Q9UKN5 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PRDM4Q9UKN5 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.15■□□□□ 0.98
PRDM4Q9UKN5 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC21.15■□□□□ 0.98
PRDM4Q9UKN5 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PRDM4Q9UKN5 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC21.14■□□□□ 0.98
PRDM4Q9UKN5 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PRDM4Q9UKN5 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC21.14■□□□□ 0.97
PRDM4Q9UKN5 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
PRDM4Q9UKN5 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PRDM4Q9UKN5 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC21.14■□□□□ 0.97
PRDM4Q9UKN5 ANKRD26P3-201ENST00000454044 2748 ntBASIC21.14■□□□□ 0.97
PRDM4Q9UKN5 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PRDM4Q9UKN5 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PRDM4Q9UKN5 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PRDM4Q9UKN5 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRDM4Q9UKN5 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
PRDM4Q9UKN5 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
PRDM4Q9UKN5 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.13■□□□□ 0.97
PRDM4Q9UKN5 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.13■□□□□ 0.97
PRDM4Q9UKN5 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRDM4Q9UKN5 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC21.13■□□□□ 0.97
PRDM4Q9UKN5 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
PRDM4Q9UKN5 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRDM4Q9UKN5 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.13■□□□□ 0.97
PRDM4Q9UKN5 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.13■□□□□ 0.97
PRDM4Q9UKN5 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.13■□□□□ 0.97
PRDM4Q9UKN5 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.13■□□□□ 0.97
PRDM4Q9UKN5 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PRDM4Q9UKN5 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRDM4Q9UKN5 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRDM4Q9UKN5 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.13■□□□□ 0.97
PRDM4Q9UKN5 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
PRDM4Q9UKN5 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRDM4Q9UKN5 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRDM4Q9UKN5 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PRDM4Q9UKN5 AL596257.1-201ENST00000641463 2694 ntBASIC21.12■□□□□ 0.97
PRDM4Q9UKN5 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRDM4Q9UKN5 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRDM4Q9UKN5 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PRDM4Q9UKN5 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
PRDM4Q9UKN5 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.12■□□□□ 0.97
PRDM4Q9UKN5 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.12■□□□□ 0.97
PRDM4Q9UKN5 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
PRDM4Q9UKN5 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRDM4Q9UKN5 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
PRDM4Q9UKN5 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PRDM4Q9UKN5 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRDM4Q9UKN5 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC21.12■□□□□ 0.97
PRDM4Q9UKN5 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PRDM4Q9UKN5 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRDM4Q9UKN5 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PRDM4Q9UKN5 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRDM4Q9UKN5 PCDHA12-202ENST00000613593 2588 ntBASIC21.11■□□□□ 0.97
PRDM4Q9UKN5 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PRDM4Q9UKN5 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.11■□□□□ 0.97
PRDM4Q9UKN5 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRDM4Q9UKN5 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.11■□□□□ 0.97
PRDM4Q9UKN5 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRDM4Q9UKN5 PTGES2-AS1-201ENST00000443493 2100 ntBASIC21.11■□□□□ 0.97
PRDM4Q9UKN5 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRDM4Q9UKN5 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PRDM4Q9UKN5 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRDM4Q9UKN5 FST-202ENST00000396947 2538 ntTSL 5 BASIC21.11■□□□□ 0.97
PRDM4Q9UKN5 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.11■□□□□ 0.97
PRDM4Q9UKN5 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRDM4Q9UKN5 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
PRDM4Q9UKN5 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
PRDM4Q9UKN5 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.1■□□□□ 0.97
PRDM4Q9UKN5 AL512408.1-201ENST00000569378 2000 ntBASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms