Protein–RNA interactions for Protein: Q9NR81

ARHGEF3, Rho guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3Q9NR81 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ARHGEF3Q9NR81 KRT16P2-201ENST00000414673 1423 ntBASIC21.65■■□□□ 1.06
ARHGEF3Q9NR81 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ARHGEF3Q9NR81 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ARHGEF3Q9NR81 LSM12P1-201ENST00000411836 588 ntBASIC21.65■■□□□ 1.06
ARHGEF3Q9NR81 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
ARHGEF3Q9NR81 UBE2SP1-201ENST00000450587 669 ntBASIC21.65■■□□□ 1.06
ARHGEF3Q9NR81 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.65■■□□□ 1.06
ARHGEF3Q9NR81 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.65■■□□□ 1.06
ARHGEF3Q9NR81 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.65■■□□□ 1.06
ARHGEF3Q9NR81 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
ARHGEF3Q9NR81 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ARHGEF3Q9NR81 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
ARHGEF3Q9NR81 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
ARHGEF3Q9NR81 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
ARHGEF3Q9NR81 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.64■■□□□ 1.06
ARHGEF3Q9NR81 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ARHGEF3Q9NR81 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
ARHGEF3Q9NR81 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.64■■□□□ 1.05
ARHGEF3Q9NR81 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ARHGEF3Q9NR81 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ARHGEF3Q9NR81 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.64■■□□□ 1.05
ARHGEF3Q9NR81 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.64■■□□□ 1.05
ARHGEF3Q9NR81 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.64■■□□□ 1.05
ARHGEF3Q9NR81 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
ARHGEF3Q9NR81 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ARHGEF3Q9NR81 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
ARHGEF3Q9NR81 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ARHGEF3Q9NR81 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
ARHGEF3Q9NR81 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.63■■□□□ 1.05
ARHGEF3Q9NR81 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
ARHGEF3Q9NR81 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
ARHGEF3Q9NR81 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ARHGEF3Q9NR81 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.63■■□□□ 1.05
ARHGEF3Q9NR81 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.63■■□□□ 1.05
ARHGEF3Q9NR81 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ARHGEF3Q9NR81 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ARHGEF3Q9NR81 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ARHGEF3Q9NR81 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
ARHGEF3Q9NR81 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ARHGEF3Q9NR81 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ARHGEF3Q9NR81 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.63■■□□□ 1.05
ARHGEF3Q9NR81 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.63■■□□□ 1.05
ARHGEF3Q9NR81 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
ARHGEF3Q9NR81 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ARHGEF3Q9NR81 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
ARHGEF3Q9NR81 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.63■■□□□ 1.05
ARHGEF3Q9NR81 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
ARHGEF3Q9NR81 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
ARHGEF3Q9NR81 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ARHGEF3Q9NR81 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ARHGEF3Q9NR81 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
ARHGEF3Q9NR81 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.62■■□□□ 1.05
ARHGEF3Q9NR81 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ARHGEF3Q9NR81 AL359736.2-201ENST00000621992 437 ntBASIC21.62■■□□□ 1.05
ARHGEF3Q9NR81 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.62■■□□□ 1.05
ARHGEF3Q9NR81 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.62■■□□□ 1.05
ARHGEF3Q9NR81 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.62■■□□□ 1.05
ARHGEF3Q9NR81 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.62■■□□□ 1.05
ARHGEF3Q9NR81 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ARHGEF3Q9NR81 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
ARHGEF3Q9NR81 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ARHGEF3Q9NR81 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ARHGEF3Q9NR81 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ARHGEF3Q9NR81 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ARHGEF3Q9NR81 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
ARHGEF3Q9NR81 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.61■■□□□ 1.05
ARHGEF3Q9NR81 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
ARHGEF3Q9NR81 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
ARHGEF3Q9NR81 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.61■■□□□ 1.05
ARHGEF3Q9NR81 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.61■■□□□ 1.05
ARHGEF3Q9NR81 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
ARHGEF3Q9NR81 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.61■■□□□ 1.05
ARHGEF3Q9NR81 AC243732.1-201ENST00000612648 864 ntBASIC21.61■■□□□ 1.05
ARHGEF3Q9NR81 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ARHGEF3Q9NR81 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.61■■□□□ 1.05
ARHGEF3Q9NR81 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ARHGEF3Q9NR81 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
ARHGEF3Q9NR81 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ARHGEF3Q9NR81 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ARHGEF3Q9NR81 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ARHGEF3Q9NR81 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.6■■□□□ 1.05
ARHGEF3Q9NR81 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ARHGEF3Q9NR81 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ARHGEF3Q9NR81 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.6■■□□□ 1.05
ARHGEF3Q9NR81 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.6■■□□□ 1.05
ARHGEF3Q9NR81 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
ARHGEF3Q9NR81 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.6■■□□□ 1.05
ARHGEF3Q9NR81 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
ARHGEF3Q9NR81 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.6■■□□□ 1.05
ARHGEF3Q9NR81 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.6■■□□□ 1.05
ARHGEF3Q9NR81 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.6■■□□□ 1.05
ARHGEF3Q9NR81 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ARHGEF3Q9NR81 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.59■■□□□ 1.05
ARHGEF3Q9NR81 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ARHGEF3Q9NR81 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ARHGEF3Q9NR81 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.59■■□□□ 1.05
ARHGEF3Q9NR81 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.59■■□□□ 1.05
ARHGEF3Q9NR81 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ARHGEF3Q9NR81 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms