Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NEUROD4Q9HD90 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
NEUROD4Q9HD90 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NEUROD4Q9HD90 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
NEUROD4Q9HD90 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NEUROD4Q9HD90 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
NEUROD4Q9HD90 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NEUROD4Q9HD90 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.33■□□□□ 0.68
NEUROD4Q9HD90 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
NEUROD4Q9HD90 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.33■□□□□ 0.68
NEUROD4Q9HD90 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NEUROD4Q9HD90 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.33■□□□□ 0.68
NEUROD4Q9HD90 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NEUROD4Q9HD90 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.33■□□□□ 0.68
NEUROD4Q9HD90 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.33■□□□□ 0.68
NEUROD4Q9HD90 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NEUROD4Q9HD90 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NEUROD4Q9HD90 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.33■□□□□ 0.68
NEUROD4Q9HD90 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
NEUROD4Q9HD90 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NEUROD4Q9HD90 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
NEUROD4Q9HD90 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
NEUROD4Q9HD90 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
NEUROD4Q9HD90 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NEUROD4Q9HD90 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.32■□□□□ 0.68
NEUROD4Q9HD90 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.32■□□□□ 0.68
NEUROD4Q9HD90 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
NEUROD4Q9HD90 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
NEUROD4Q9HD90 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
NEUROD4Q9HD90 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NEUROD4Q9HD90 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.31■□□□□ 0.68
NEUROD4Q9HD90 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NEUROD4Q9HD90 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
NEUROD4Q9HD90 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NEUROD4Q9HD90 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NEUROD4Q9HD90 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NEUROD4Q9HD90 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.31■□□□□ 0.68
NEUROD4Q9HD90 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NEUROD4Q9HD90 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.31■□□□□ 0.68
NEUROD4Q9HD90 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.31■□□□□ 0.68
NEUROD4Q9HD90 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.31■□□□□ 0.68
NEUROD4Q9HD90 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.31■□□□□ 0.68
NEUROD4Q9HD90 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.31■□□□□ 0.68
NEUROD4Q9HD90 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NEUROD4Q9HD90 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
NEUROD4Q9HD90 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
NEUROD4Q9HD90 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
NEUROD4Q9HD90 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.31■□□□□ 0.68
NEUROD4Q9HD90 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NEUROD4Q9HD90 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NEUROD4Q9HD90 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NEUROD4Q9HD90 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
NEUROD4Q9HD90 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NEUROD4Q9HD90 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NEUROD4Q9HD90 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NEUROD4Q9HD90 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
NEUROD4Q9HD90 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
NEUROD4Q9HD90 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NEUROD4Q9HD90 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NEUROD4Q9HD90 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.3■□□□□ 0.68
NEUROD4Q9HD90 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NEUROD4Q9HD90 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
NEUROD4Q9HD90 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NEUROD4Q9HD90 KRT18P5-201ENST00000436075 1291 ntBASIC19.3■□□□□ 0.68
NEUROD4Q9HD90 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
NEUROD4Q9HD90 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.3■□□□□ 0.68
NEUROD4Q9HD90 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NEUROD4Q9HD90 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NEUROD4Q9HD90 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NEUROD4Q9HD90 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.3■□□□□ 0.68
NEUROD4Q9HD90 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
NEUROD4Q9HD90 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
NEUROD4Q9HD90 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.3■□□□□ 0.68
NEUROD4Q9HD90 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.3■□□□□ 0.68
NEUROD4Q9HD90 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.3■□□□□ 0.68
NEUROD4Q9HD90 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NEUROD4Q9HD90 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
NEUROD4Q9HD90 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NEUROD4Q9HD90 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NEUROD4Q9HD90 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
NEUROD4Q9HD90 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NEUROD4Q9HD90 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NEUROD4Q9HD90 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.29■□□□□ 0.68
NEUROD4Q9HD90 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NEUROD4Q9HD90 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.29■□□□□ 0.68
NEUROD4Q9HD90 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.29■□□□□ 0.68
NEUROD4Q9HD90 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NEUROD4Q9HD90 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NEUROD4Q9HD90 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.29■□□□□ 0.68
NEUROD4Q9HD90 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NEUROD4Q9HD90 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
NEUROD4Q9HD90 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NEUROD4Q9HD90 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NEUROD4Q9HD90 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NEUROD4Q9HD90 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.29■□□□□ 0.68
NEUROD4Q9HD90 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NEUROD4Q9HD90 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NEUROD4Q9HD90 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NEUROD4Q9HD90 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NEUROD4Q9HD90 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms