Protein–RNA interactions for Protein: Q9H649

NSUN3, tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial, humanhuman

Known RBP Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSUN3Q9H649 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
NSUN3Q9H649 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
NSUN3Q9H649 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NSUN3Q9H649 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.82■■□□□ 1.08
NSUN3Q9H649 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
NSUN3Q9H649 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
NSUN3Q9H649 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NSUN3Q9H649 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
NSUN3Q9H649 TMPOP1-202ENST00000424642 1267 ntBASIC21.82■■□□□ 1.08
NSUN3Q9H649 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NSUN3Q9H649 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.82■■□□□ 1.08
NSUN3Q9H649 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NSUN3Q9H649 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.82■■□□□ 1.08
NSUN3Q9H649 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC21.82■■□□□ 1.08
NSUN3Q9H649 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NSUN3Q9H649 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NSUN3Q9H649 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
NSUN3Q9H649 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.81■■□□□ 1.08
NSUN3Q9H649 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NSUN3Q9H649 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NSUN3Q9H649 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NSUN3Q9H649 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NSUN3Q9H649 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
NSUN3Q9H649 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NSUN3Q9H649 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.81■■□□□ 1.08
NSUN3Q9H649 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.81■■□□□ 1.08
NSUN3Q9H649 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.81■■□□□ 1.08
NSUN3Q9H649 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NSUN3Q9H649 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
NSUN3Q9H649 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
NSUN3Q9H649 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NSUN3Q9H649 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.81■■□□□ 1.08
NSUN3Q9H649 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.81■■□□□ 1.08
NSUN3Q9H649 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.81■■□□□ 1.08
NSUN3Q9H649 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NSUN3Q9H649 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
NSUN3Q9H649 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
NSUN3Q9H649 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NSUN3Q9H649 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NSUN3Q9H649 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NSUN3Q9H649 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
NSUN3Q9H649 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.8■■□□□ 1.08
NSUN3Q9H649 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.8■■□□□ 1.08
NSUN3Q9H649 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.8■■□□□ 1.08
NSUN3Q9H649 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NSUN3Q9H649 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NSUN3Q9H649 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
NSUN3Q9H649 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NSUN3Q9H649 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NSUN3Q9H649 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NSUN3Q9H649 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
NSUN3Q9H649 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
NSUN3Q9H649 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.79■■□□□ 1.08
NSUN3Q9H649 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.79■■□□□ 1.08
NSUN3Q9H649 AC092053.2-201ENST00000640557 1818 ntBASIC21.79■■□□□ 1.08
NSUN3Q9H649 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.79■■□□□ 1.08
NSUN3Q9H649 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NSUN3Q9H649 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.79■■□□□ 1.08
NSUN3Q9H649 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.79■■□□□ 1.08
NSUN3Q9H649 AC005829.2-201ENST00000571422 1056 ntBASIC21.79■■□□□ 1.08
NSUN3Q9H649 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NSUN3Q9H649 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NSUN3Q9H649 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NSUN3Q9H649 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
NSUN3Q9H649 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NSUN3Q9H649 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NSUN3Q9H649 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NSUN3Q9H649 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.78■■□□□ 1.08
NSUN3Q9H649 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NSUN3Q9H649 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NSUN3Q9H649 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NSUN3Q9H649 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.78■■□□□ 1.08
NSUN3Q9H649 AC006557.6-201ENST00000623071 864 ntBASIC21.78■■□□□ 1.08
NSUN3Q9H649 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.78■■□□□ 1.08
NSUN3Q9H649 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NSUN3Q9H649 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.78■■□□□ 1.08
NSUN3Q9H649 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NSUN3Q9H649 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NSUN3Q9H649 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
NSUN3Q9H649 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
NSUN3Q9H649 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
NSUN3Q9H649 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
NSUN3Q9H649 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NSUN3Q9H649 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
NSUN3Q9H649 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NSUN3Q9H649 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NSUN3Q9H649 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.77■■□□□ 1.08
NSUN3Q9H649 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.77■■□□□ 1.08
NSUN3Q9H649 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.77■■□□□ 1.08
NSUN3Q9H649 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NSUN3Q9H649 KRT18P35-201ENST00000510488 1269 ntBASIC21.77■■□□□ 1.08
NSUN3Q9H649 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.77■■□□□ 1.08
NSUN3Q9H649 RN7SL850P-201ENST00000579959 291 ntBASIC21.77■■□□□ 1.08
NSUN3Q9H649 NT5C-211ENST00000582170 653 ntTSL 3 BASIC21.77■■□□□ 1.08
NSUN3Q9H649 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NSUN3Q9H649 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NSUN3Q9H649 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NSUN3Q9H649 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
NSUN3Q9H649 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NSUN3Q9H649 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms