Protein–RNA interactions for Protein: Q9H3R0

KDM4C, Lysine-specific demethylase 4C, humanhuman

Predictions only

Length 1,056 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4CQ9H3R0 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
KDM4CQ9H3R0 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
KDM4CQ9H3R0 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KDM4CQ9H3R0 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KDM4CQ9H3R0 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
KDM4CQ9H3R0 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KDM4CQ9H3R0 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.31■■□□□ 1
KDM4CQ9H3R0 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KDM4CQ9H3R0 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KDM4CQ9H3R0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
KDM4CQ9H3R0 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.31■■□□□ 1
KDM4CQ9H3R0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
KDM4CQ9H3R0 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
KDM4CQ9H3R0 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.31■■□□□ 1
KDM4CQ9H3R0 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KDM4CQ9H3R0 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KDM4CQ9H3R0 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
KDM4CQ9H3R0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
KDM4CQ9H3R0 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.31■■□□□ 1
KDM4CQ9H3R0 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.31■■□□□ 1
KDM4CQ9H3R0 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.31■■□□□ 1
KDM4CQ9H3R0 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.31■■□□□ 1
KDM4CQ9H3R0 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.31■■□□□ 1
KDM4CQ9H3R0 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KDM4CQ9H3R0 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.31■■□□□ 1
KDM4CQ9H3R0 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
KDM4CQ9H3R0 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
KDM4CQ9H3R0 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
KDM4CQ9H3R0 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
KDM4CQ9H3R0 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.3■■□□□ 1
KDM4CQ9H3R0 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.3■■□□□ 1
KDM4CQ9H3R0 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
KDM4CQ9H3R0 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
KDM4CQ9H3R0 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
KDM4CQ9H3R0 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
KDM4CQ9H3R0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.3■■□□□ 1
KDM4CQ9H3R0 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.3■■□□□ 1
KDM4CQ9H3R0 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.3■■□□□ 1
KDM4CQ9H3R0 MIR663A-201ENST00000385250 93 ntBASIC21.3■■□□□ 1
KDM4CQ9H3R0 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
KDM4CQ9H3R0 AC007322.1-201ENST00000426983 750 ntBASIC21.3■■□□□ 1
KDM4CQ9H3R0 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.3■■□□□ 1
KDM4CQ9H3R0 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.3■■□□□ 1
KDM4CQ9H3R0 AL109923.1-201ENST00000618799 583 ntBASIC21.3■■□□□ 1
KDM4CQ9H3R0 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
KDM4CQ9H3R0 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.3■■□□□ 1
KDM4CQ9H3R0 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
KDM4CQ9H3R0 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
KDM4CQ9H3R0 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.3■■□□□ 1
KDM4CQ9H3R0 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
KDM4CQ9H3R0 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
KDM4CQ9H3R0 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
KDM4CQ9H3R0 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.29■■□□□ 1
KDM4CQ9H3R0 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
KDM4CQ9H3R0 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KDM4CQ9H3R0 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
KDM4CQ9H3R0 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
KDM4CQ9H3R0 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KDM4CQ9H3R0 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KDM4CQ9H3R0 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.29■■□□□ 1
KDM4CQ9H3R0 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KDM4CQ9H3R0 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KDM4CQ9H3R0 GPX1P1-201ENST00000388829 606 ntBASIC21.29■■□□□ 1
KDM4CQ9H3R0 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.29■■□□□ 1
KDM4CQ9H3R0 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.29■■□□□ 1
KDM4CQ9H3R0 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.29■■□□□ 1
KDM4CQ9H3R0 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
KDM4CQ9H3R0 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.29■■□□□ 1
KDM4CQ9H3R0 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.29■■□□□ 1
KDM4CQ9H3R0 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KDM4CQ9H3R0 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.28■■□□□ 1
KDM4CQ9H3R0 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.28■■□□□ 1
KDM4CQ9H3R0 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KDM4CQ9H3R0 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.28■■□□□ 1
KDM4CQ9H3R0 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.28■■□□□ 1
KDM4CQ9H3R0 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KDM4CQ9H3R0 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KDM4CQ9H3R0 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
KDM4CQ9H3R0 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.28■■□□□ 1
KDM4CQ9H3R0 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
KDM4CQ9H3R0 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
KDM4CQ9H3R0 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
KDM4CQ9H3R0 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
KDM4CQ9H3R0 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.28■■□□□ 1
KDM4CQ9H3R0 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
KDM4CQ9H3R0 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
KDM4CQ9H3R0 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KDM4CQ9H3R0 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KDM4CQ9H3R0 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.27■■□□□ 1
KDM4CQ9H3R0 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.27■■□□□ 1
KDM4CQ9H3R0 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.27■■□□□ 1
KDM4CQ9H3R0 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.27■■□□□ 1
KDM4CQ9H3R0 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.27■■□□□ 1
KDM4CQ9H3R0 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KDM4CQ9H3R0 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KDM4CQ9H3R0 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
KDM4CQ9H3R0 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
KDM4CQ9H3R0 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KDM4CQ9H3R0 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KDM4CQ9H3R0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms