Protein–RNA interactions for Protein: Q9H0K1

SIK2, Serine/threonine-protein kinase SIK2, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIK2Q9H0K1 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SIK2Q9H0K1 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.29■■□□□ 1
SIK2Q9H0K1 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SIK2Q9H0K1 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.29■■□□□ 1
SIK2Q9H0K1 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
SIK2Q9H0K1 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.29■■□□□ 1
SIK2Q9H0K1 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.29■■□□□ 1
SIK2Q9H0K1 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.29■■□□□ 1
SIK2Q9H0K1 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.28■■□□□ 1
SIK2Q9H0K1 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SIK2Q9H0K1 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
SIK2Q9H0K1 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.28■■□□□ 1
SIK2Q9H0K1 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.28■■□□□ 1
SIK2Q9H0K1 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.28■■□□□ 1
SIK2Q9H0K1 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.28■■□□□ 1
SIK2Q9H0K1 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.28■■□□□ 1
SIK2Q9H0K1 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
SIK2Q9H0K1 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.28■■□□□ 1
SIK2Q9H0K1 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.28■■□□□ 1
SIK2Q9H0K1 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.27■■□□□ 1
SIK2Q9H0K1 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
SIK2Q9H0K1 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
SIK2Q9H0K1 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SIK2Q9H0K1 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.27■■□□□ 1
SIK2Q9H0K1 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.27■■□□□ 1
SIK2Q9H0K1 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SIK2Q9H0K1 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.27■■□□□ 1
SIK2Q9H0K1 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SIK2Q9H0K1 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.27■■□□□ 1
SIK2Q9H0K1 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.27■■□□□ 1
SIK2Q9H0K1 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
SIK2Q9H0K1 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
SIK2Q9H0K1 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
SIK2Q9H0K1 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.27■■□□□ 1
SIK2Q9H0K1 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SIK2Q9H0K1 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
SIK2Q9H0K1 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SIK2Q9H0K1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SIK2Q9H0K1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.27■□□□□ 0.99
SIK2Q9H0K1 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.27■□□□□ 0.99
SIK2Q9H0K1 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
SIK2Q9H0K1 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SIK2Q9H0K1 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SIK2Q9H0K1 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SIK2Q9H0K1 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SIK2Q9H0K1 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SIK2Q9H0K1 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SIK2Q9H0K1 HLA-L-209ENST00000420110 1011 ntBASIC21.26■□□□□ 0.99
SIK2Q9H0K1 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.26■□□□□ 0.99
SIK2Q9H0K1 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
SIK2Q9H0K1 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.26■□□□□ 0.99
SIK2Q9H0K1 AL109923.1-201ENST00000618799 583 ntBASIC21.26■□□□□ 0.99
SIK2Q9H0K1 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.26■□□□□ 0.99
SIK2Q9H0K1 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SIK2Q9H0K1 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SIK2Q9H0K1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SIK2Q9H0K1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.26■□□□□ 0.99
SIK2Q9H0K1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.26■□□□□ 0.99
SIK2Q9H0K1 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
SIK2Q9H0K1 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SIK2Q9H0K1 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.26■□□□□ 0.99
SIK2Q9H0K1 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.26■□□□□ 0.99
SIK2Q9H0K1 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SIK2Q9H0K1 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.26■□□□□ 0.99
SIK2Q9H0K1 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SIK2Q9H0K1 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SIK2Q9H0K1 MKRN4P-201ENST00000444706 1521 ntBASIC21.25■□□□□ 0.99
SIK2Q9H0K1 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SIK2Q9H0K1 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
SIK2Q9H0K1 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SIK2Q9H0K1 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SIK2Q9H0K1 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SIK2Q9H0K1 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SIK2Q9H0K1 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
SIK2Q9H0K1 ID1-201ENST00000376105 1233 ntBASIC21.25■□□□□ 0.99
SIK2Q9H0K1 AL512625.2-201ENST00000417533 625 ntBASIC21.25■□□□□ 0.99
SIK2Q9H0K1 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.25■□□□□ 0.99
SIK2Q9H0K1 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.25■□□□□ 0.99
SIK2Q9H0K1 AC010980.2-201ENST00000587099 1412 ntBASIC21.25■□□□□ 0.99
SIK2Q9H0K1 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
SIK2Q9H0K1 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SIK2Q9H0K1 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
SIK2Q9H0K1 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.24■□□□□ 0.99
SIK2Q9H0K1 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SIK2Q9H0K1 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
SIK2Q9H0K1 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SIK2Q9H0K1 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.24■□□□□ 0.99
SIK2Q9H0K1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SIK2Q9H0K1 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.24■□□□□ 0.99
SIK2Q9H0K1 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SIK2Q9H0K1 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SIK2Q9H0K1 AL355472.2-201ENST00000422958 438 ntBASIC21.24■□□□□ 0.99
SIK2Q9H0K1 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.24■□□□□ 0.99
SIK2Q9H0K1 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.24■□□□□ 0.99
SIK2Q9H0K1 AC006128.1-201ENST00000624704 1661 ntBASIC21.24■□□□□ 0.99
SIK2Q9H0K1 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SIK2Q9H0K1 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SIK2Q9H0K1 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SIK2Q9H0K1 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.23■□□□□ 0.99
SIK2Q9H0K1 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms