Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SPG11Q96JI7 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.48■□□□□ 0.39
SPG11Q96JI7 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.48■□□□□ 0.39
SPG11Q96JI7 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
SPG11Q96JI7 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPG11Q96JI7 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.48■□□□□ 0.39
SPG11Q96JI7 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPG11Q96JI7 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
SPG11Q96JI7 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SPG11Q96JI7 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.48■□□□□ 0.39
SPG11Q96JI7 KRASP1-201ENST00000407852 552 ntBASIC17.48■□□□□ 0.39
SPG11Q96JI7 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.48■□□□□ 0.39
SPG11Q96JI7 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.48■□□□□ 0.39
SPG11Q96JI7 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.48■□□□□ 0.39
SPG11Q96JI7 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.48■□□□□ 0.39
SPG11Q96JI7 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SPG11Q96JI7 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SPG11Q96JI7 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SPG11Q96JI7 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC17.47■□□□□ 0.39
SPG11Q96JI7 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SPG11Q96JI7 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SPG11Q96JI7 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.47■□□□□ 0.39
SPG11Q96JI7 MIR6786-201ENST00000616843 113 ntBASIC17.47■□□□□ 0.39
SPG11Q96JI7 AL590326.2-201ENST00000625139 305 ntBASIC17.47■□□□□ 0.39
SPG11Q96JI7 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SPG11Q96JI7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
SPG11Q96JI7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
SPG11Q96JI7 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SPG11Q96JI7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.47■□□□□ 0.39
SPG11Q96JI7 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SPG11Q96JI7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SPG11Q96JI7 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SPG11Q96JI7 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SPG11Q96JI7 PKM-204ENST00000449901 2526 ntTSL 2 BASIC17.47■□□□□ 0.39
SPG11Q96JI7 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.47■□□□□ 0.39
SPG11Q96JI7 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.47■□□□□ 0.39
SPG11Q96JI7 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
SPG11Q96JI7 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SPG11Q96JI7 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.46■□□□□ 0.39
SPG11Q96JI7 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPG11Q96JI7 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.46■□□□□ 0.39
SPG11Q96JI7 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.46■□□□□ 0.39
SPG11Q96JI7 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SPG11Q96JI7 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.46■□□□□ 0.39
SPG11Q96JI7 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.46■□□□□ 0.39
SPG11Q96JI7 AC005829.2-201ENST00000571422 1056 ntBASIC17.46■□□□□ 0.39
SPG11Q96JI7 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.46■□□□□ 0.39
SPG11Q96JI7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.46■□□□□ 0.39
SPG11Q96JI7 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.46■□□□□ 0.39
SPG11Q96JI7 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPG11Q96JI7 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPG11Q96JI7 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SPG11Q96JI7 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
SPG11Q96JI7 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
SPG11Q96JI7 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SPG11Q96JI7 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SPG11Q96JI7 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SPG11Q96JI7 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SPG11Q96JI7 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.38
SPG11Q96JI7 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SPG11Q96JI7 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPG11Q96JI7 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPG11Q96JI7 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPG11Q96JI7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SPG11Q96JI7 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SPG11Q96JI7 AC068473.5-201ENST00000616428 2072 ntBASIC17.45■□□□□ 0.38
SPG11Q96JI7 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPG11Q96JI7 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPG11Q96JI7 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.45■□□□□ 0.38
SPG11Q96JI7 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.45■□□□□ 0.38
SPG11Q96JI7 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.45■□□□□ 0.38
SPG11Q96JI7 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.45■□□□□ 0.38
SPG11Q96JI7 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.45■□□□□ 0.38
SPG11Q96JI7 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.45■□□□□ 0.38
SPG11Q96JI7 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.45■□□□□ 0.38
SPG11Q96JI7 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.45■□□□□ 0.38
SPG11Q96JI7 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.45■□□□□ 0.38
SPG11Q96JI7 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SPG11Q96JI7 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPG11Q96JI7 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.45■□□□□ 0.38
SPG11Q96JI7 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SPG11Q96JI7 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SPG11Q96JI7 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPG11Q96JI7 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPG11Q96JI7 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPG11Q96JI7 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.45■□□□□ 0.38
SPG11Q96JI7 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.45■□□□□ 0.38
SPG11Q96JI7 KRT18P22-201ENST00000402024 1347 ntBASIC17.44■□□□□ 0.38
SPG11Q96JI7 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.44■□□□□ 0.38
SPG11Q96JI7 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SPG11Q96JI7 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC17.44■□□□□ 0.38
SPG11Q96JI7 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SPG11Q96JI7 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SPG11Q96JI7 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SPG11Q96JI7 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SPG11Q96JI7 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SPG11Q96JI7 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.44■□□□□ 0.38
SPG11Q96JI7 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.44■□□□□ 0.38
SPG11Q96JI7 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SPG11Q96JI7 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms