Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13BQ7Z7G8 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
VPS13BQ7Z7G8 RBM42-202ENST00000586618 771 ntTSL 3 BASIC12.78□□□□□ -0.36
VPS13BQ7Z7G8 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
VPS13BQ7Z7G8 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
VPS13BQ7Z7G8 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC12.77□□□□□ -0.36
VPS13BQ7Z7G8 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
VPS13BQ7Z7G8 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
VPS13BQ7Z7G8 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
VPS13BQ7Z7G8 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
VPS13BQ7Z7G8 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC12.77□□□□□ -0.36
VPS13BQ7Z7G8 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
VPS13BQ7Z7G8 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
VPS13BQ7Z7G8 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC12.77□□□□□ -0.36
VPS13BQ7Z7G8 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC12.77□□□□□ -0.36
VPS13BQ7Z7G8 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
VPS13BQ7Z7G8 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC12.77□□□□□ -0.36
VPS13BQ7Z7G8 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC12.77□□□□□ -0.36
VPS13BQ7Z7G8 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
VPS13BQ7Z7G8 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
VPS13BQ7Z7G8 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC12.77□□□□□ -0.36
VPS13BQ7Z7G8 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
VPS13BQ7Z7G8 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VPS13BQ7Z7G8 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC12.77□□□□□ -0.37
VPS13BQ7Z7G8 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
VPS13BQ7Z7G8 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
VPS13BQ7Z7G8 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC12.77□□□□□ -0.37
VPS13BQ7Z7G8 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC12.77□□□□□ -0.37
VPS13BQ7Z7G8 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.37
VPS13BQ7Z7G8 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
VPS13BQ7Z7G8 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
VPS13BQ7Z7G8 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
VPS13BQ7Z7G8 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VPS13BQ7Z7G8 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
VPS13BQ7Z7G8 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC12.77□□□□□ -0.37
VPS13BQ7Z7G8 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC12.77□□□□□ -0.37
VPS13BQ7Z7G8 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
VPS13BQ7Z7G8 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VPS13BQ7Z7G8 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS13BQ7Z7G8 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
VPS13BQ7Z7G8 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS13BQ7Z7G8 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS13BQ7Z7G8 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
VPS13BQ7Z7G8 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS13BQ7Z7G8 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS13BQ7Z7G8 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VPS13BQ7Z7G8 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS13BQ7Z7G8 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VPS13BQ7Z7G8 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS13BQ7Z7G8 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC12.76□□□□□ -0.37
VPS13BQ7Z7G8 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VPS13BQ7Z7G8 PENK-204ENST00000518770 863 ntTSL 2 BASIC12.76□□□□□ -0.37
VPS13BQ7Z7G8 AC113410.3-201ENST00000623366 203 ntBASIC12.76□□□□□ -0.37
VPS13BQ7Z7G8 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS13BQ7Z7G8 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
VPS13BQ7Z7G8 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS13BQ7Z7G8 AC113347.1-201ENST00000413321 391 ntBASIC12.76□□□□□ -0.37
VPS13BQ7Z7G8 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC12.76□□□□□ -0.37
VPS13BQ7Z7G8 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC12.76□□□□□ -0.37
VPS13BQ7Z7G8 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC12.76□□□□□ -0.37
VPS13BQ7Z7G8 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS13BQ7Z7G8 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC12.76□□□□□ -0.37
VPS13BQ7Z7G8 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VPS13BQ7Z7G8 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS13BQ7Z7G8 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS13BQ7Z7G8 GALC-202ENST00000393568 2054 ntTSL 2 BASIC12.76□□□□□ -0.37
VPS13BQ7Z7G8 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
VPS13BQ7Z7G8 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC12.76□□□□□ -0.37
VPS13BQ7Z7G8 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC12.76□□□□□ -0.37
VPS13BQ7Z7G8 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS13BQ7Z7G8 AC105020.6-201ENST00000621523 1217 ntBASIC12.76□□□□□ -0.37
VPS13BQ7Z7G8 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC12.76□□□□□ -0.37
VPS13BQ7Z7G8 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS13BQ7Z7G8 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
VPS13BQ7Z7G8 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
VPS13BQ7Z7G8 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
VPS13BQ7Z7G8 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC12.75□□□□□ -0.37
VPS13BQ7Z7G8 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
VPS13BQ7Z7G8 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC12.75□□□□□ -0.37
VPS13BQ7Z7G8 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
VPS13BQ7Z7G8 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
VPS13BQ7Z7G8 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
VPS13BQ7Z7G8 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
VPS13BQ7Z7G8 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VPS13BQ7Z7G8 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VPS13BQ7Z7G8 CRAT-202ENST00000393384 973 ntTSL 2 BASIC12.75□□□□□ -0.37
VPS13BQ7Z7G8 VMO1-204ENST00000441199 741 ntTSL 2 BASIC12.75□□□□□ -0.37
VPS13BQ7Z7G8 TK2-204ENST00000525974 1178 ntTSL 2 BASIC12.75□□□□□ -0.37
VPS13BQ7Z7G8 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC12.75□□□□□ -0.37
VPS13BQ7Z7G8 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
VPS13BQ7Z7G8 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VPS13BQ7Z7G8 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
VPS13BQ7Z7G8 PALM-207ENST00000590161 2137 ntTSL 4 BASIC12.75□□□□□ -0.37
VPS13BQ7Z7G8 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
VPS13BQ7Z7G8 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
VPS13BQ7Z7G8 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
VPS13BQ7Z7G8 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VPS13BQ7Z7G8 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC12.74□□□□□ -0.37
VPS13BQ7Z7G8 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC12.74□□□□□ -0.37
VPS13BQ7Z7G8 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms