Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00242Q5T6M2 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00242Q5T6M2 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
LINC00242Q5T6M2 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
LINC00242Q5T6M2 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00242Q5T6M2 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00242Q5T6M2 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00242Q5T6M2 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC14□□□□□ -0.17
LINC00242Q5T6M2 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00242Q5T6M2 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC14□□□□□ -0.17
LINC00242Q5T6M2 AP004607.4-201ENST00000530158 1459 ntBASIC14□□□□□ -0.17
LINC00242Q5T6M2 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC14□□□□□ -0.17
LINC00242Q5T6M2 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC14□□□□□ -0.17
LINC00242Q5T6M2 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC14□□□□□ -0.17
LINC00242Q5T6M2 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC00242Q5T6M2 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00242Q5T6M2 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00242Q5T6M2 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC14□□□□□ -0.17
LINC00242Q5T6M2 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC00242Q5T6M2 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00242Q5T6M2 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
LINC00242Q5T6M2 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00242Q5T6M2 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00242Q5T6M2 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC00242Q5T6M2 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00242Q5T6M2 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC14□□□□□ -0.17
LINC00242Q5T6M2 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
LINC00242Q5T6M2 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC14□□□□□ -0.17
LINC00242Q5T6M2 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC14□□□□□ -0.17
LINC00242Q5T6M2 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00242Q5T6M2 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC14□□□□□ -0.17
LINC00242Q5T6M2 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LINC00242Q5T6M2 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00242Q5T6M2 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
LINC00242Q5T6M2 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00242Q5T6M2 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00242Q5T6M2 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00242Q5T6M2 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
LINC00242Q5T6M2 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC14□□□□□ -0.17
LINC00242Q5T6M2 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
LINC00242Q5T6M2 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC14□□□□□ -0.17
LINC00242Q5T6M2 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00242Q5T6M2 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00242Q5T6M2 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC14□□□□□ -0.17
LINC00242Q5T6M2 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00242Q5T6M2 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC14□□□□□ -0.17
LINC00242Q5T6M2 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00242Q5T6M2 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC14□□□□□ -0.17
LINC00242Q5T6M2 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC14□□□□□ -0.17
LINC00242Q5T6M2 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00242Q5T6M2 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC00242Q5T6M2 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00242Q5T6M2 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00242Q5T6M2 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
LINC00242Q5T6M2 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
LINC00242Q5T6M2 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00242Q5T6M2 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00242Q5T6M2 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
LINC00242Q5T6M2 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00242Q5T6M2 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC13.99□□□□□ -0.17
LINC00242Q5T6M2 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00242Q5T6M2 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00242Q5T6M2 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00242Q5T6M2 IGHV3-19-201ENST00000521488 291 ntBASIC13.99□□□□□ -0.17
LINC00242Q5T6M2 AC126544.1-201ENST00000580842 1059 ntBASIC13.99□□□□□ -0.17
LINC00242Q5T6M2 AC233992.3-201ENST00000607491 485 ntBASIC13.99□□□□□ -0.17
LINC00242Q5T6M2 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC13.99□□□□□ -0.17
LINC00242Q5T6M2 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC13.99□□□□□ -0.17
LINC00242Q5T6M2 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00242Q5T6M2 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00242Q5T6M2 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
LINC00242Q5T6M2 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00242Q5T6M2 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC00242Q5T6M2 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
LINC00242Q5T6M2 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00242Q5T6M2 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00242Q5T6M2 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
LINC00242Q5T6M2 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
LINC00242Q5T6M2 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00242Q5T6M2 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC13.99□□□□□ -0.17
LINC00242Q5T6M2 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00242Q5T6M2 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC13.99□□□□□ -0.17
LINC00242Q5T6M2 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00242Q5T6M2 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC00242Q5T6M2 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
LINC00242Q5T6M2 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00242Q5T6M2 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
LINC00242Q5T6M2 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00242Q5T6M2 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00242Q5T6M2 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00242Q5T6M2 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
LINC00242Q5T6M2 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
LINC00242Q5T6M2 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00242Q5T6M2 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00242Q5T6M2 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC13.98□□□□□ -0.17
LINC00242Q5T6M2 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC00242Q5T6M2 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00242Q5T6M2 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
LINC00242Q5T6M2 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC13.98□□□□□ -0.17
LINC00242Q5T6M2 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 239.5 ms