Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CDH17Q12864 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH17Q12864 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDH17Q12864 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.73■□□□□ 0.91
CDH17Q12864 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.73■□□□□ 0.91
CDH17Q12864 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH17Q12864 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CDH17Q12864 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH17Q12864 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH17Q12864 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CDH17Q12864 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDH17Q12864 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CDH17Q12864 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CDH17Q12864 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.72■□□□□ 0.91
CDH17Q12864 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CDH17Q12864 AC007322.3-201ENST00000426526 701 ntBASIC20.72■□□□□ 0.91
CDH17Q12864 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.72■□□□□ 0.91
CDH17Q12864 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
CDH17Q12864 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CDH17Q12864 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.72■□□□□ 0.91
CDH17Q12864 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.72■□□□□ 0.91
CDH17Q12864 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDH17Q12864 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDH17Q12864 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.72■□□□□ 0.91
CDH17Q12864 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CDH17Q12864 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH17Q12864 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.71■□□□□ 0.91
CDH17Q12864 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH17Q12864 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH17Q12864 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH17Q12864 AL121603.2-201ENST00000557373 2117 ntBASIC20.71■□□□□ 0.91
CDH17Q12864 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDH17Q12864 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDH17Q12864 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH17Q12864 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDH17Q12864 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH17Q12864 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDH17Q12864 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CDH17Q12864 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.71■□□□□ 0.91
CDH17Q12864 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.71■□□□□ 0.91
CDH17Q12864 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDH17Q12864 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH17Q12864 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH17Q12864 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CDH17Q12864 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH17Q12864 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH17Q12864 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.7■□□□□ 0.9
CDH17Q12864 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH17Q12864 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.7■□□□□ 0.9
CDH17Q12864 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH17Q12864 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
CDH17Q12864 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH17Q12864 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH17Q12864 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDH17Q12864 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CDH17Q12864 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.7■□□□□ 0.9
CDH17Q12864 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.7■□□□□ 0.9
CDH17Q12864 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
CDH17Q12864 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CDH17Q12864 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.7■□□□□ 0.9
CDH17Q12864 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.7■□□□□ 0.9
CDH17Q12864 MIR2861-201ENST00000636310 90 ntBASIC20.7■□□□□ 0.9
CDH17Q12864 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDH17Q12864 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDH17Q12864 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH17Q12864 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.7■□□□□ 0.9
CDH17Q12864 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.7■□□□□ 0.9
CDH17Q12864 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.7■□□□□ 0.9
CDH17Q12864 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.7■□□□□ 0.9
CDH17Q12864 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH17Q12864 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CDH17Q12864 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDH17Q12864 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
CDH17Q12864 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH17Q12864 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDH17Q12864 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.69■□□□□ 0.9
CDH17Q12864 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH17Q12864 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.69■□□□□ 0.9
CDH17Q12864 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH17Q12864 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH17Q12864 KRT18P11-201ENST00000435214 1283 ntBASIC20.69■□□□□ 0.9
CDH17Q12864 CDV3P1-201ENST00000471403 739 ntBASIC20.69■□□□□ 0.9
CDH17Q12864 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDH17Q12864 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH17Q12864 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH17Q12864 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH17Q12864 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDH17Q12864 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDH17Q12864 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CDH17Q12864 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH17Q12864 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CDH17Q12864 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH17Q12864 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH17Q12864 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.68■□□□□ 0.9
CDH17Q12864 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.68■□□□□ 0.9
CDH17Q12864 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH17Q12864 AC026271.2-201ENST00000428091 497 ntBASIC20.68■□□□□ 0.9
CDH17Q12864 KRT18P5-201ENST00000436075 1291 ntBASIC20.68■□□□□ 0.9
CDH17Q12864 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.68■□□□□ 0.9
CDH17Q12864 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms