Protein–RNA interactions for Protein: Q06623

HDA3, HDA1 complex subunit 3, yeastyeast

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HDA3Q06623 AIM9YER080W 1884 nt4.17□□□□□ -1.74
HDA3Q06623 BNA4YBL098W 1383 nt4.16□□□□□ -1.74
HDA3Q06623 AIM11YER093C-A 414 nt4.16□□□□□ -1.74
HDA3Q06623 YGL052WYGL052W 306 nt4.16□□□□□ -1.74
HDA3Q06623 YBR197CYBR197C 654 nt4.16□□□□□ -1.74
HDA3Q06623 ARK1YNL020C 1917 nt4.15□□□□□ -1.74
HDA3Q06623 YIL032CYIL032C 357 nt4.15□□□□□ -1.75
HDA3Q06623 ISA1YLL027W 753 nt4.15□□□□□ -1.75
HDA3Q06623 HHF1YBR009C 312 nt4.15□□□□□ -1.75
HDA3Q06623 BRE4YDL231C 3378 nt4.14□□□□□ -1.75
HDA3Q06623 YPK9YOR291W 4419 nt4.14□□□□□ -1.75
HDA3Q06623 21S_rRNA21S_rRNA 3296 nt4.14□□□□□ -1.75
HDA3Q06623 MSS11YMR164C 2277 nt4.14□□□□□ -1.75
HDA3Q06623 HPA3YEL066W 540 nt4.14□□□□□ -1.75
HDA3Q06623 YJL020W-AYJL020W-A 258 nt4.14□□□□□ -1.75
HDA3Q06623 YJL150WYJL150W 303 nt4.14□□□□□ -1.75
HDA3Q06623 SLM2YNL047C 1971 nt4.14□□□□□ -1.75
HDA3Q06623 UBP5YER144C 2418 nt4.14□□□□□ -1.75
HDA3Q06623 SEA4YBL104C 3117 nt4.14□□□□□ -1.75
HDA3Q06623 TRZ1YKR079C 2517 nt4.14□□□□□ -1.75
HDA3Q06623 FAS2YPL231W 5664 nt4.13□□□□□ -1.75
HDA3Q06623 RIA1YNL163C 3333 nt4.13□□□□□ -1.75
HDA3Q06623 RIM20YOR275C 1986 nt4.13□□□□□ -1.75
HDA3Q06623 GPG1YGL121C 381 nt4.13□□□□□ -1.75
HDA3Q06623 ULS1YOR191W 4860 nt4.13□□□□□ -1.75
HDA3Q06623 VIK1YPL253C 1944 nt4.13□□□□□ -1.75
HDA3Q06623 LYP1YNL268W 1836 nt4.12□□□□□ -1.75
HDA3Q06623 YER088C-AYER088C-A 324 nt4.12□□□□□ -1.75
HDA3Q06623 YLR416CYLR416C 399 nt4.12□□□□□ -1.75
HDA3Q06623 NMA111YNL123W 2994 nt4.11□□□□□ -1.75
HDA3Q06623 TRS85YDR108W 2097 nt4.11□□□□□ -1.75
HDA3Q06623 RPL14AYKL006W 417 nt4.11□□□□□ -1.75
HDA3Q06623 COA4YLR218C 453 nt4.11□□□□□ -1.75
HDA3Q06623 RPS18BYML026C 441 nt4.11□□□□□ -1.75
HDA3Q06623 YOR302WYOR302W 78 nt4.11□□□□□ -1.75
HDA3Q06623 PRP39YML046W 1890 nt4.11□□□□□ -1.75
HDA3Q06623 SHQ1YIL104C 1524 nt4.11□□□□□ -1.75
HDA3Q06623 FRT2YAL028W 1587 nt4.1□□□□□ -1.75
HDA3Q06623 YDL176WYDL176W 2127 nt4.1□□□□□ -1.75
HDA3Q06623 tL(UAG)JtL(UAG)J 82 nt4.1□□□□□ -1.75
HDA3Q06623 tL(UAG)L1tL(UAG)L1 82 nt4.1□□□□□ -1.75
HDA3Q06623 tL(UAG)L2tL(UAG)L2 82 nt4.1□□□□□ -1.75
HDA3Q06623 ASC1YMR116C 960 nt4.1□□□□□ -1.75
HDA3Q06623 CDC45YLR103C 1953 nt4.1□□□□□ -1.75
HDA3Q06623 MSD1YPL104W 1977 nt4.1□□□□□ -1.75
HDA3Q06623 RAD1YPL022W 3303 nt4.1□□□□□ -1.75
HDA3Q06623 YKU70YMR284W 1809 nt4.09□□□□□ -1.75
HDA3Q06623 NCE101YJL205C 162 nt4.09□□□□□ -1.75
HDA3Q06623 YMR141W-AYMR141W-A 225 nt4.09□□□□□ -1.75
HDA3Q06623 SWD3YBR175W 948 nt4.09□□□□□ -1.75
HDA3Q06623 FOX2YKR009C 2703 nt4.09□□□□□ -1.75
HDA3Q06623 BFA1YJR053W 1725 nt4.09□□□□□ -1.76
HDA3Q06623 YGR237CYGR237C 2358 nt4.09□□□□□ -1.76
HDA3Q06623 YDL041WYDL041W 354 nt4.08□□□□□ -1.76
HDA3Q06623 HFM1YGL251C 3564 nt4.08□□□□□ -1.76
HDA3Q06623 POG1YIL122W 1056 nt4.08□□□□□ -1.76
HDA3Q06623 YSH1YLR277C 2340 nt4.08□□□□□ -1.76
HDA3Q06623 YMR172C-AYMR172C-A 384 nt4.08□□□□□ -1.76
HDA3Q06623 RPL32YBL092W 393 nt4.08□□□□□ -1.76
HDA3Q06623 YBR178WYBR178W 375 nt4.08□□□□□ -1.76
HDA3Q06623 YEL014CYEL014C 306 nt4.07□□□□□ -1.76
HDA3Q06623 LSM1YJL124C 519 nt4.07□□□□□ -1.76
HDA3Q06623 YJL135WYJL135W 318 nt4.07□□□□□ -1.76
HDA3Q06623 SHH3YMR118C 591 nt4.07□□□□□ -1.76
HDA3Q06623 ATP15YPL271W 189 nt4.07□□□□□ -1.76
HDA3Q06623 IOC3YFR013W 2364 nt4.07□□□□□ -1.76
HDA3Q06623 RRN6YBL014C 2685 nt4.06□□□□□ -1.76
HDA3Q06623 YCF1YDR135C 4548 nt4.06□□□□□ -1.76
HDA3Q06623 YIL058WYIL058W 285 nt4.06□□□□□ -1.76
HDA3Q06623 CCW14YLR390W-A 717 nt4.06□□□□□ -1.76
HDA3Q06623 YPR053CYPR053C 456 nt4.06□□□□□ -1.76
HDA3Q06623 YPK1YKL126W 2043 nt4.05□□□□□ -1.76
HDA3Q06623 CDH1YGL003C 1701 nt4.05□□□□□ -1.76
HDA3Q06623 BCK2YER167W 2556 nt4.05□□□□□ -1.76
HDA3Q06623 NUP82YJL061W 2142 nt4.05□□□□□ -1.76
HDA3Q06623 YLR053CYLR053C 327 nt4.05□□□□□ -1.76
HDA3Q06623 snR48snR48 113 nt4.05□□□□□ -1.76
HDA3Q06623 SPC105YGL093W 2754 nt4.05□□□□□ -1.76
HDA3Q06623 PDR12YPL058C 4536 nt4.05□□□□□ -1.76
HDA3Q06623 MIS1YBR084W 2928 nt4.04□□□□□ -1.76
HDA3Q06623 YDR246W-AYDR246W-A 201 nt4.04□□□□□ -1.76
HDA3Q06623 PAU2YEL049W 363 nt4.04□□□□□ -1.76
HDA3Q06623 TIM13YGR181W 318 nt4.04□□□□□ -1.76
HDA3Q06623 YNL010WYNL010W 726 nt4.04□□□□□ -1.76
HDA3Q06623 MNT3YIL014W 1893 nt4.04□□□□□ -1.76
HDA3Q06623 CIN1YOR349W 3045 nt4.04□□□□□ -1.76
HDA3Q06623 HOS3YPL116W 2094 nt4.04□□□□□ -1.76
HDA3Q06623 MSK1YNL073W 1731 nt4.04□□□□□ -1.76
HDA3Q06623 NUP133YKR082W 3474 nt4.03□□□□□ -1.76
HDA3Q06623 PTA1YAL043C 2358 nt4.03□□□□□ -1.76
HDA3Q06623 ECM25YJL201W 1800 nt4.03□□□□□ -1.76
HDA3Q06623 YDR230WYDR230W 348 nt4.03□□□□□ -1.76
HDA3Q06623 YGR164WYGR164W 336 nt4.03□□□□□ -1.76
HDA3Q06623 YHL006W-AYHL006W-A 354 nt4.03□□□□□ -1.76
HDA3Q06623 VPS55YJR044C 423 nt4.03□□□□□ -1.76
HDA3Q06623 CYB5YNL111C 363 nt4.03□□□□□ -1.76
HDA3Q06623 ARG2YJL071W 1725 nt4.03□□□□□ -1.76
HDA3Q06623 STN1YDR082W 1485 nt4.03□□□□□ -1.76
HDA3Q06623 VHS3YOR054C 2025 nt4.02□□□□□ -1.77
HDA3Q06623 GYL1YMR192W 2163 nt4.02□□□□□ -1.77
Retrieved 100 of 7,029 protein–RNA pairs in 78.6 ms