RNA–Protein interactions for RNA: YFR013W

IOC3, Transcript of Subunit of the Isw1a complex, yeastyeast

Gene IOC3, Length 2,364 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IOC3YFR013W DRS1P32892 752 aaKnown RBP7.84□□□□□ -1.15
IOC3YFR013W MTC1P47018 478 aaKnown RBP7.72□□□□□ -1.17
IOC3YFR013W BFR2Q06631 534 aaKnown RBP6.82□□□□□ -1.32
IOC3YFR013W DIP2Q12220 943 aaPredicted RBP6.64□□□□□ -1.35
IOC3YFR013W AVT3P36062 692 aa6.61□□□□□ -1.35
IOC3YFR013W TFA1P36100 482 aa6.52□□□□□ -1.37
IOC3YFR013W RSE1Q04693 1361 aaKnown RBP6.23□□□□□ -1.41
IOC3YFR013W ISW2Q08773 1120 aa6.23□□□□□ -1.41
IOC3YFR013W FAP1P53971 965 aa6.15□□□□□ -1.42
IOC3YFR013W RPG1P38249 964 aaKnown RBP6.14□□□□□ -1.43
IOC3YFR013W PRI1P10363 409 aa6.14□□□□□ -1.43
IOC3YFR013W AAD16Q02895 342 aa6□□□□□ -1.45
IOC3YFR013W RPL17AP05740 184 aaKnown RBP5.99□□□□□ -1.45
IOC3YFR013W RPL17BP46990 184 aaKnown RBP5.99□□□□□ -1.45
IOC3YFR013W REB1P21538 810 aa5.89□□□□□ -1.47
IOC3YFR013W SPT21P35209 758 aa5.82□□□□□ -1.48
IOC3YFR013W TSR3Q12094 313 aaKnown RBP5.81□□□□□ -1.48
IOC3YFR013W PRY3P47033 881 aa5.77□□□□□ -1.49
IOC3YFR013W RIM101P33400 625 aa5.75□□□□□ -1.49
IOC3YFR013W RQC2Q12532 1038 aaKnown RBP5.6□□□□□ -1.51
IOC3YFR013W YKR023WP36119 530 aaKnown RBP5.59□□□□□ -1.51
IOC3YFR013W PTP3P40048 928 aa5.58□□□□□ -1.52
IOC3YFR013W MRPL32P25348 183 aa5.58□□□□□ -1.52
IOC3YFR013W OXP1P28273 1286 aa5.58□□□□□ -1.52
IOC3YFR013W SSP1P38871 571 aa5.53□□□□□ -1.52
IOC3YFR013W YCK3P39962 524 aa5.52□□□□□ -1.53
IOC3YFR013W TFC8Q12308 588 aa5.48□□□□□ -1.53
IOC3YFR013W YAH1Q12184 172 aaKnown RBP5.47□□□□□ -1.53
IOC3YFR013W HAA1Q12753 694 aaKnown RBP5.46□□□□□ -1.54
IOC3YFR013W HOP09932 586 aa5.45□□□□□ -1.54
IOC3YFR013W YIL055CP40523 627 aaKnown RBP5.45□□□□□ -1.54
IOC3YFR013W CDC27P38042 758 aa5.44□□□□□ -1.54
IOC3YFR013W TAF7Q05021 590 aa5.44□□□□□ -1.54
IOC3YFR013W YLR271WQ06152 274 aa5.44□□□□□ -1.54
IOC3YFR013W DCD1P06773 312 aa5.41□□□□□ -1.54
IOC3YFR013W ARP8Q12386 881 aaKnown RBP RIP-Chip data5.41□□□□□ -1.54not detected
IOC3YFR013W DMA1P38823 416 aa5.4□□□□□ -1.55
IOC3YFR013W RSM7P47150 247 aa5.4□□□□□ -1.55
IOC3YFR013W MGA2P40578 1113 aa5.33□□□□□ -1.56
IOC3YFR013W BCH2P36122 765 aa5.31□□□□□ -1.56
IOC3YFR013W AI2P03876 854 aa5.29□□□□□ -1.56
IOC3YFR013W PSD2P53037 1138 aaKnown RBP5.29□□□□□ -1.56
IOC3YFR013W CST9Q06032 482 aa5.28□□□□□ -1.56
IOC3YFR013W BBC1P47068 1157 aa5.24□□□□□ -1.57
IOC3YFR013W EPS1P40557 701 aa5.23□□□□□ -1.57
IOC3YFR013W UBP10P53874 792 aaPredicted RBP5.21□□□□□ -1.58
IOC3YFR013W BDF1P35817 686 aa5.19□□□□□ -1.58
IOC3YFR013W MAP2P38174 421 aaKnown RBP5.19□□□□□ -1.58
IOC3YFR013W SCY1P53009 804 aa5.19□□□□□ -1.58
IOC3YFR013W YGL015CP33199 130 aa5.17□□□□□ -1.58
IOC3YFR013W MRM1P25270 412 aa5.13□□□□□ -1.59
IOC3YFR013W RAM2P29703 316 aa5.11□□□□□ -1.59
IOC3YFR013W SAS10Q12136 610 aaPredicted RBP5.11□□□□□ -1.59
IOC3YFR013W SLX5P32828 619 aaKnown RBP5.09□□□□□ -1.59
IOC3YFR013W RCR1P38212 213 aa5.09□□□□□ -1.59
IOC3YFR013W RTG3P38165 486 aa5.07□□□□□ -1.6
IOC3YFR013W VPS29P38759 282 aa5.02□□□□□ -1.61
IOC3YFR013W MAK11P20484 414 aaKnown RBP5.01□□□□□ -1.61
IOC3YFR013W SET1P38827 1080 aaKnown RBP5.01□□□□□ -1.61
IOC3YFR013W YPR148CQ06523 435 aa4.98□□□□□ -1.61
IOC3YFR013W LEU3P08638 886 aa4.97□□□□□ -1.61
IOC3YFR013W TIF4632P39936 914 aaKnown RBP4.97□□□□□ -1.61
IOC3YFR013W YMR1P47147 688 aaKnown RBP RIP-Chip data4.97□□□□□ -1.61not detected
IOC3YFR013W NSR1P27476 414 aaKnown RBP RIP-Chip data4.96□□□□□ -1.62not detected
IOC3YFR013W STS1P38637 319 aa4.96□□□□□ -1.62
IOC3YFR013W LEO1P38439 464 aa4.95□□□□□ -1.62
IOC3YFR013W IFH1P39520 1085 aa4.94□□□□□ -1.62
IOC3YFR013W COQ8P27697 501 aa4.94□□□□□ -1.62
IOC3YFR013W TGL3P40308 642 aa4.94□□□□□ -1.62
IOC3YFR013W DBP1P24784 617 aaKnown RBP4.93□□□□□ -1.62
IOC3YFR013W YOR238WQ08634 303 aa4.92□□□□□ -1.62
IOC3YFR013W YFR006WP43590 535 aa4.91□□□□□ -1.62
IOC3YFR013W VPS70P47161 811 aa4.91□□□□□ -1.62
IOC3YFR013W CKB1P43639 278 aa4.91□□□□□ -1.62
IOC3YFR013W NOP53Q12080 455 aaKnown RBP4.91□□□□□ -1.62
IOC3YFR013W EDS1P38073 919 aa4.9□□□□□ -1.62
IOC3YFR013W YAP5P40574 245 aa4.9□□□□□ -1.63
IOC3YFR013W MIF2P35201 549 aa4.88□□□□□ -1.63
IOC3YFR013W PIB1Q06651 286 aa4.85□□□□□ -1.63
IOC3YFR013W PTC3P34221 468 aaKnown RBP4.84□□□□□ -1.63
IOC3YFR013W MST1P07236 462 aa4.84□□□□□ -1.64
IOC3YFR013W VMA1P17255 1071 aaKnown RBP4.84□□□□□ -1.64
IOC3YFR013W SPB4P25808 606 aaPredicted RBP4.84□□□□□ -1.64
IOC3YFR013W DSF2P38213 736 aa4.83□□□□□ -1.64
IOC3YFR013W PBS2P08018 668 aa4.82□□□□□ -1.64
IOC3YFR013W RPN1P38764 993 aaKnown RBP4.8□□□□□ -1.64
IOC3YFR013W SAM3Q08986 587 aa4.8□□□□□ -1.64
IOC3YFR013W REF2P42073 533 aaPredicted RBP4.79□□□□□ -1.64
IOC3YFR013W GRE2Q12068 342 aaKnown RBP4.77□□□□□ -1.65
IOC3YFR013W GUT1P32190 709 aa4.76□□□□□ -1.65
IOC3YFR013W ATH1P48016 1211 aa4.76□□□□□ -1.65
IOC3YFR013W MAK21Q12176 1025 aaKnown RBP4.75□□□□□ -1.65
IOC3YFR013W GTT3P39996 337 aa4.75□□□□□ -1.65
IOC3YFR013W MAM3Q12296 706 aa4.75□□□□□ -1.65
IOC3YFR013W GYP5Q12344 894 aa4.73□□□□□ -1.65
IOC3YFR013W COX6P00427 148 aa4.73□□□□□ -1.65
IOC3YFR013W IES2P40154 320 aa4.73□□□□□ -1.65
IOC3YFR013W YNR021WP53723 404 aaKnown RBP4.73□□□□□ -1.65
IOC3YFR013W UBP14P38237 781 aaKnown RBP4.72□□□□□ -1.65
IOC3YFR013W SOL3P38858 249 aa4.72□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms