Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
IRX4P78413 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
IRX4P78413 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.23■□□□□ 0.99
IRX4P78413 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
IRX4P78413 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
IRX4P78413 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.23■□□□□ 0.99
IRX4P78413 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
IRX4P78413 AC055733.4-201ENST00000638462 1354 ntBASIC21.23■□□□□ 0.99
IRX4P78413 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
IRX4P78413 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.22■□□□□ 0.99
IRX4P78413 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
IRX4P78413 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
IRX4P78413 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
IRX4P78413 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
IRX4P78413 MIPEPP3-201ENST00000412105 444 ntBASIC21.22■□□□□ 0.99
IRX4P78413 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
IRX4P78413 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
IRX4P78413 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
IRX4P78413 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.22■□□□□ 0.99
IRX4P78413 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
IRX4P78413 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
IRX4P78413 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.21■□□□□ 0.99
IRX4P78413 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.21■□□□□ 0.99
IRX4P78413 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.21■□□□□ 0.99
IRX4P78413 KRT18P20-201ENST00000548986 1279 ntBASIC21.21■□□□□ 0.99
IRX4P78413 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
IRX4P78413 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
IRX4P78413 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
IRX4P78413 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
IRX4P78413 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
IRX4P78413 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.21■□□□□ 0.99
IRX4P78413 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.99
IRX4P78413 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
IRX4P78413 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
IRX4P78413 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
IRX4P78413 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
IRX4P78413 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
IRX4P78413 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.2■□□□□ 0.98
IRX4P78413 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
IRX4P78413 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
IRX4P78413 AC010141.2-201ENST00000452426 721 ntBASIC21.2■□□□□ 0.98
IRX4P78413 RPS2P52-201ENST00000469610 820 ntBASIC21.2■□□□□ 0.98
IRX4P78413 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.2■□□□□ 0.98
IRX4P78413 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.2■□□□□ 0.98
IRX4P78413 AC138907.5-202ENST00000569484 235 ntBASIC21.2■□□□□ 0.98
IRX4P78413 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.2■□□□□ 0.98
IRX4P78413 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
IRX4P78413 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
IRX4P78413 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
IRX4P78413 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.2■□□□□ 0.98
IRX4P78413 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.2■□□□□ 0.98
IRX4P78413 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
IRX4P78413 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.2■□□□□ 0.98
IRX4P78413 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
IRX4P78413 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
IRX4P78413 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
IRX4P78413 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
IRX4P78413 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.19■□□□□ 0.98
IRX4P78413 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.19■□□□□ 0.98
IRX4P78413 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
IRX4P78413 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
IRX4P78413 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
IRX4P78413 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.19■□□□□ 0.98
IRX4P78413 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
IRX4P78413 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.19■□□□□ 0.98
IRX4P78413 AC013268.1-206ENST00000638368 961 ntBASIC21.19■□□□□ 0.98
IRX4P78413 AC112229.1-201ENST00000639295 961 ntBASIC21.19■□□□□ 0.98
IRX4P78413 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
IRX4P78413 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.19■□□□□ 0.98
IRX4P78413 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
IRX4P78413 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
IRX4P78413 MKRN4P-201ENST00000444706 1521 ntBASIC21.19■□□□□ 0.98
IRX4P78413 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
IRX4P78413 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
IRX4P78413 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.18■□□□□ 0.98
IRX4P78413 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
IRX4P78413 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
IRX4P78413 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
IRX4P78413 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.18■□□□□ 0.98
IRX4P78413 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
IRX4P78413 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
IRX4P78413 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
IRX4P78413 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
IRX4P78413 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
IRX4P78413 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
IRX4P78413 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
IRX4P78413 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.18■□□□□ 0.98
IRX4P78413 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
IRX4P78413 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
IRX4P78413 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.18■□□□□ 0.98
IRX4P78413 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
IRX4P78413 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.18■□□□□ 0.98
IRX4P78413 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.18■□□□□ 0.98
IRX4P78413 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.18■□□□□ 0.98
IRX4P78413 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.18■□□□□ 0.98
IRX4P78413 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.18■□□□□ 0.98
IRX4P78413 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
IRX4P78413 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.18■□□□□ 0.98
IRX4P78413 AC068338.2-201ENST00000563278 1430 ntBASIC21.18■□□□□ 0.98
IRX4P78413 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms