Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH13P55290 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH13P55290 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.04■□□□□ 0.8
CDH13P55290 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CDH13P55290 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH13P55290 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.04■□□□□ 0.8
CDH13P55290 KRT16P2-201ENST00000414673 1423 ntBASIC20.04■□□□□ 0.8
CDH13P55290 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH13P55290 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
CDH13P55290 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.04■□□□□ 0.8
CDH13P55290 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH13P55290 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDH13P55290 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.04■□□□□ 0.8
CDH13P55290 AC010141.2-201ENST00000452426 721 ntBASIC20.04■□□□□ 0.8
CDH13P55290 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDH13P55290 SLC7A5P2-201ENST00000553010 536 ntBASIC20.04■□□□□ 0.8
CDH13P55290 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.04■□□□□ 0.8
CDH13P55290 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDH13P55290 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CDH13P55290 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH13P55290 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH13P55290 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDH13P55290 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.04■□□□□ 0.8
CDH13P55290 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.03■□□□□ 0.8
CDH13P55290 AL162377.1-201ENST00000618844 1793 ntBASIC20.03■□□□□ 0.8
CDH13P55290 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH13P55290 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDH13P55290 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH13P55290 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDH13P55290 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH13P55290 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.03■□□□□ 0.8
CDH13P55290 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH13P55290 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.03■□□□□ 0.8
CDH13P55290 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH13P55290 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH13P55290 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDH13P55290 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDH13P55290 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDH13P55290 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDH13P55290 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDH13P55290 AC245052.3-201ENST00000450182 901 ntBASIC20.02■□□□□ 0.8
CDH13P55290 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.02■□□□□ 0.8
CDH13P55290 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.02■□□□□ 0.8
CDH13P55290 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.02■□□□□ 0.8
CDH13P55290 AC120498.10-201ENST00000621827 505 ntBASIC20.02■□□□□ 0.8
CDH13P55290 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CDH13P55290 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDH13P55290 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
CDH13P55290 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.02■□□□□ 0.79
CDH13P55290 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.02■□□□□ 0.79
CDH13P55290 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
CDH13P55290 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CDH13P55290 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.02■□□□□ 0.79
CDH13P55290 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH13P55290 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH13P55290 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.01■□□□□ 0.79
CDH13P55290 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.01■□□□□ 0.79
CDH13P55290 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CDH13P55290 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.01■□□□□ 0.79
CDH13P55290 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDH13P55290 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDH13P55290 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.01■□□□□ 0.79
CDH13P55290 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CDH13P55290 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDH13P55290 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CDH13P55290 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.01■□□□□ 0.79
CDH13P55290 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDH13P55290 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20■□□□□ 0.79
CDH13P55290 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20■□□□□ 0.79
CDH13P55290 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20■□□□□ 0.79
CDH13P55290 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20■□□□□ 0.79
CDH13P55290 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDH13P55290 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDH13P55290 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDH13P55290 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDH13P55290 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDH13P55290 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20■□□□□ 0.79
CDH13P55290 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20■□□□□ 0.79
CDH13P55290 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CDH13P55290 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDH13P55290 DUX4L2-201ENST00000561772 1275 ntBASIC20■□□□□ 0.79
CDH13P55290 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20■□□□□ 0.79
CDH13P55290 AP001160.3-201ENST00000601484 763 ntBASIC20■□□□□ 0.79
CDH13P55290 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20■□□□□ 0.79
CDH13P55290 DUX4L6-201ENST00000626483 1275 ntBASIC20■□□□□ 0.79
CDH13P55290 DUX4L1-201ENST00000627662 1275 ntBASIC20■□□□□ 0.79
CDH13P55290 DUX4L8-201ENST00000629013 1275 ntBASIC20■□□□□ 0.79
CDH13P55290 DUX4L3-201ENST00000630187 1275 ntBASIC20■□□□□ 0.79
CDH13P55290 DUX4L7-201ENST00000630678 1275 ntBASIC20■□□□□ 0.79
CDH13P55290 DUX4L5-201ENST00000630834 1275 ntBASIC20■□□□□ 0.79
CDH13P55290 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20■□□□□ 0.79
CDH13P55290 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDH13P55290 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CDH13P55290 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CDH13P55290 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20■□□□□ 0.79
CDH13P55290 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDH13P55290 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20■□□□□ 0.79
CDH13P55290 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20■□□□□ 0.79
CDH13P55290 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDH13P55290 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms