Protein–RNA interactions for Protein: P41817

CUP9, Homeobox protein CUP9, yeastyeast

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUP9P41817 URA5YML106W 681 nt1.44□□□□□ -2.18
CUP9P41817 FYV6YNL133C 522 nt1.44□□□□□ -2.18
CUP9P41817 GIM3YNL153C 390 nt1.44□□□□□ -2.18
CUP9P41817 CDC31YOR257W 486 nt1.44□□□□□ -2.18
CUP9P41817 PKH3YDR466W 2697 nt1.44□□□□□ -2.18
CUP9P41817 SLK19YOR195W 2466 nt1.44□□□□□ -2.18
CUP9P41817 MEC1YBR136W 7107 nt1.44□□□□□ -2.18
CUP9P41817 SLD5YDR489W 885 nt1.43□□□□□ -2.18
CUP9P41817 YGL204CYGL204C 306 nt1.43□□□□□ -2.18
CUP9P41817 PSF2YJL072C 642 nt1.43□□□□□ -2.18
CUP9P41817 RPA34YJL148W 702 nt1.43□□□□□ -2.18
CUP9P41817 RFA3YJL173C 369 nt1.43□□□□□ -2.18
CUP9P41817 SHE2YKL130C 741 nt1.43□□□□□ -2.18
CUP9P41817 HRI1YLR301W 735 nt1.43□□□□□ -2.18
CUP9P41817 YML084WYML084W 309 nt1.43□□□□□ -2.18
CUP9P41817 MIX23YBL107C 591 nt1.43□□□□□ -2.18
CUP9P41817 YPR177CYPR177C 372 nt1.43□□□□□ -2.18
CUP9P41817 snR24snR24 89 nt1.43□□□□□ -2.18
CUP9P41817 YJL070CYJL070C 2667 nt1.43□□□□□ -2.18
CUP9P41817 CAT8YMR280C 4302 nt1.43□□□□□ -2.18
CUP9P41817 MES1YGR264C 2256 nt1.43□□□□□ -2.18
CUP9P41817 SEY1YOR165W 2331 nt1.43□□□□□ -2.18
CUP9P41817 HER1YOR227W 3741 nt1.42□□□□□ -2.18
CUP9P41817 CDC37YDR168W 1521 nt1.42□□□□□ -2.18
CUP9P41817 ATP16YDL004W 483 nt1.42□□□□□ -2.18
CUP9P41817 UBC5YDR059C 447 nt1.42□□□□□ -2.18
CUP9P41817 ATX2YOR079C 942 nt1.42□□□□□ -2.18
CUP9P41817 PET20YPL159C 762 nt1.42□□□□□ -2.18
CUP9P41817 snR44snR44 211 nt1.42□□□□□ -2.18
CUP9P41817 DOT6YER088C 2013 nt1.42□□□□□ -2.18
CUP9P41817 ASG1YIL130W 2895 nt1.41□□□□□ -2.18
CUP9P41817 UTP6YDR449C 1323 nt1.41□□□□□ -2.18
CUP9P41817 SSK2YNR031C 4740 nt1.41□□□□□ -2.18
CUP9P41817 CAT2YML042W 2013 nt1.41□□□□□ -2.18
CUP9P41817 NSE4YDL105W 1209 nt1.41□□□□□ -2.18
CUP9P41817 YIL102CYIL102C 306 nt1.41□□□□□ -2.18
CUP9P41817 AME1YBR211C 975 nt1.41□□□□□ -2.18
CUP9P41817 PEX34YCL056C 435 nt1.41□□□□□ -2.18
CUP9P41817 YDR338CYDR338C 2088 nt1.41□□□□□ -2.18
CUP9P41817 CTF13YMR094W 1437 nt1.4□□□□□ -2.18
CUP9P41817 SRP1YNL189W 1629 nt1.4□□□□□ -2.18
CUP9P41817 SAC3YDR159W 3906 nt1.4□□□□□ -2.18
CUP9P41817 YDL163WYDL163W 303 nt1.4□□□□□ -2.19
CUP9P41817 YDR262WYDR262W 819 nt1.4□□□□□ -2.19
CUP9P41817 YGL165CYGL165C 579 nt1.4□□□□□ -2.19
CUP9P41817 YGL242CYGL242C 546 nt1.4□□□□□ -2.19
CUP9P41817 ATG38YLR211C 681 nt1.4□□□□□ -2.19
CUP9P41817 NEJ1YLR265C 1029 nt1.4□□□□□ -2.19
CUP9P41817 YIP3YNL044W 531 nt1.4□□□□□ -2.19
CUP9P41817 YOR333CYOR333C 417 nt1.4□□□□□ -2.19
CUP9P41817 SPC72YAL047C 1869 nt1.39□□□□□ -2.19
CUP9P41817 YDR018CYDR018C 1191 nt1.39□□□□□ -2.19
CUP9P41817 ATP17YDR377W 306 nt1.39□□□□□ -2.19
CUP9P41817 YFR056CYFR056C 369 nt1.39□□□□□ -2.19
CUP9P41817 YLR053CYLR053C 327 nt1.39□□□□□ -2.19
CUP9P41817 PDP3YLR455W 915 nt1.39□□□□□ -2.19
CUP9P41817 SFM1YOR021C 642 nt1.39□□□□□ -2.19
CUP9P41817 UFE1YOR075W 1041 nt1.39□□□□□ -2.19
CUP9P41817 BAG7YOR134W 1230 nt1.39□□□□□ -2.19
CUP9P41817 TOA1YOR194C 861 nt1.39□□□□□ -2.19
CUP9P41817 CUR1YPR158W 759 nt1.39□□□□□ -2.19
CUP9P41817 MNE1YOR350C 1992 nt1.38□□□□□ -2.19
CUP9P41817 YDR199WYDR199W 366 nt1.38□□□□□ -2.19
CUP9P41817 RPL37BYDR500C 267 nt1.38□□□□□ -2.19
CUP9P41817 MIC19YFR011C 513 nt1.38□□□□□ -2.19
CUP9P41817 PRP38YGR075C 729 nt1.38□□□□□ -2.19
CUP9P41817 PFD1YJL179W 330 nt1.38□□□□□ -2.19
CUP9P41817 SYM1YLR251W 594 nt1.38□□□□□ -2.19
CUP9P41817 LSM2YBL026W 288 nt1.38□□□□□ -2.19
CUP9P41817 YNR021WYNR021W 1215 nt1.38□□□□□ -2.19
CUP9P41817 YOL162WYOL162W 648 nt1.38□□□□□ -2.19
CUP9P41817 SAR1YPL218W 573 nt1.38□□□□□ -2.19
CUP9P41817 VPS35YJL154C 2835 nt1.38□□□□□ -2.19
CUP9P41817 YGR109W-BYGR109W-B 4644 nt1.37□□□□□ -2.19
CUP9P41817 RRP15YPR143W 753 nt1.37□□□□□ -2.19
CUP9P41817 YBR287WYBR287W 1284 nt1.37□□□□□ -2.19
CUP9P41817 IRA1YBR140C 9279 nt1.37□□□□□ -2.19
CUP9P41817 SNF12YNR023W 1701 nt1.37□□□□□ -2.19
CUP9P41817 VPS38YLR360W 1320 nt1.37□□□□□ -2.19
CUP9P41817 HCS1YKL017C 2052 nt1.36□□□□□ -2.19
CUP9P41817 IPI3YNL182C 1668 nt1.36□□□□□ -2.19
CUP9P41817 CDC53YDL132W 2448 nt1.36□□□□□ -2.19
CUP9P41817 FMP16YDR070C 282 nt1.36□□□□□ -2.19
CUP9P41817 HOP2YGL033W 657 nt1.36□□□□□ -2.19
CUP9P41817 ARG3YJL088W 1017 nt1.36□□□□□ -2.19
CUP9P41817 SNC1YAL030W 354 nt1.36□□□□□ -2.19
CUP9P41817 SMD2YLR275W 333 nt1.36□□□□□ -2.19
CUP9P41817 MRPL44YMR225C 297 nt1.36□□□□□ -2.19
CUP9P41817 SWM2YNR004W 441 nt1.36□□□□□ -2.19
CUP9P41817 YOL085W-AYOL085W-A 213 nt1.36□□□□□ -2.19
CUP9P41817 PEX27YOR193W 1131 nt1.36□□□□□ -2.19
CUP9P41817 TYE7YOR344C 876 nt1.36□□□□□ -2.19
CUP9P41817 YOR366WYOR366W 354 nt1.36□□□□□ -2.19
CUP9P41817 CUP9YPL177C 921 nt1.36□□□□□ -2.19
CUP9P41817 CIN2YPL241C 807 nt1.36□□□□□ -2.19
CUP9P41817 MSH3YCR092C 3057 nt1.36□□□□□ -2.19
CUP9P41817 UBP11YKR098C 2154 nt1.35□□□□□ -2.19
CUP9P41817 YHR022CYHR022C 771 nt1.35□□□□□ -2.19
CUP9P41817 RPN8YOR261C 1017 nt1.35□□□□□ -2.19
CUP9P41817 YBR051WYBR051W 351 nt1.35□□□□□ -2.19
Retrieved 100 of 7,029 protein–RNA pairs in 19.6 ms