Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
LSP1P33241 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.61■□□□□ 0.89
LSP1P33241 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LSP1P33241 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LSP1P33241 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
LSP1P33241 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.6■□□□□ 0.89
LSP1P33241 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LSP1P33241 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.6■□□□□ 0.89
LSP1P33241 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
LSP1P33241 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
LSP1P33241 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.6■□□□□ 0.89
LSP1P33241 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LSP1P33241 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LSP1P33241 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
LSP1P33241 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.6■□□□□ 0.89
LSP1P33241 AC087239.1-201ENST00000622671 572 ntBASIC20.6■□□□□ 0.89
LSP1P33241 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.6■□□□□ 0.89
LSP1P33241 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LSP1P33241 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LSP1P33241 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LSP1P33241 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
LSP1P33241 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
LSP1P33241 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.59■□□□□ 0.89
LSP1P33241 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.59■□□□□ 0.89
LSP1P33241 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
LSP1P33241 AP006587.3-201ENST00000525742 1516 ntBASIC20.59■□□□□ 0.89
LSP1P33241 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LSP1P33241 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.59■□□□□ 0.89
LSP1P33241 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
LSP1P33241 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
LSP1P33241 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LSP1P33241 AC010141.3-201ENST00000456659 717 ntBASIC20.59■□□□□ 0.89
LSP1P33241 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.59■□□□□ 0.89
LSP1P33241 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.59■□□□□ 0.89
LSP1P33241 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LSP1P33241 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.59■□□□□ 0.89
LSP1P33241 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LSP1P33241 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.59■□□□□ 0.89
LSP1P33241 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.59■□□□□ 0.89
LSP1P33241 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LSP1P33241 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.59■□□□□ 0.89
LSP1P33241 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
LSP1P33241 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LSP1P33241 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.58■□□□□ 0.89
LSP1P33241 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.58■□□□□ 0.89
LSP1P33241 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.58■□□□□ 0.89
LSP1P33241 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LSP1P33241 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LSP1P33241 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LSP1P33241 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.58■□□□□ 0.89
LSP1P33241 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LSP1P33241 AC010980.1-201ENST00000587192 1142 ntBASIC20.58■□□□□ 0.89
LSP1P33241 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LSP1P33241 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
LSP1P33241 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LSP1P33241 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
LSP1P33241 AC092720.2-201ENST00000602388 1665 ntBASIC20.58■□□□□ 0.88
LSP1P33241 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LSP1P33241 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LSP1P33241 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
LSP1P33241 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LSP1P33241 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.57■□□□□ 0.88
LSP1P33241 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LSP1P33241 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
LSP1P33241 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LSP1P33241 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.57■□□□□ 0.88
LSP1P33241 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
LSP1P33241 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LSP1P33241 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.57■□□□□ 0.88
LSP1P33241 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.57■□□□□ 0.88
LSP1P33241 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
LSP1P33241 AC093484.2-201ENST00000580996 2166 ntBASIC20.57■□□□□ 0.88
LSP1P33241 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LSP1P33241 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.57■□□□□ 0.88
LSP1P33241 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LSP1P33241 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LSP1P33241 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.57■□□□□ 0.88
LSP1P33241 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.56■□□□□ 0.88
LSP1P33241 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LSP1P33241 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LSP1P33241 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
LSP1P33241 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LSP1P33241 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LSP1P33241 YBX1P4-201ENST00000392794 808 ntBASIC20.56■□□□□ 0.88
LSP1P33241 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LSP1P33241 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.56■□□□□ 0.88
LSP1P33241 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.56■□□□□ 0.88
LSP1P33241 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.56■□□□□ 0.88
LSP1P33241 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
LSP1P33241 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LSP1P33241 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LSP1P33241 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LSP1P33241 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LSP1P33241 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.56■□□□□ 0.88
LSP1P33241 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
LSP1P33241 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LSP1P33241 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
LSP1P33241 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.55■□□□□ 0.88
LSP1P33241 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LSP1P33241 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms