Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.96■□□□□ 0.47
UBCP0CG48 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.96■□□□□ 0.47
UBCP0CG48 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.96■□□□□ 0.47
UBCP0CG48 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBCP0CG48 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBCP0CG48 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBCP0CG48 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBCP0CG48 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
UBCP0CG48 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.96■□□□□ 0.46
UBCP0CG48 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
UBCP0CG48 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
UBCP0CG48 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBCP0CG48 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UBCP0CG48 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
UBCP0CG48 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBCP0CG48 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBCP0CG48 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.95■□□□□ 0.46
UBCP0CG48 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UBCP0CG48 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
UBCP0CG48 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBCP0CG48 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBCP0CG48 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.95■□□□□ 0.46
UBCP0CG48 AC079140.4-201ENST00000507448 529 ntBASIC17.95■□□□□ 0.46
UBCP0CG48 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.95■□□□□ 0.46
UBCP0CG48 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBCP0CG48 AL031432.3-201ENST00000607698 485 ntBASIC17.95■□□□□ 0.46
UBCP0CG48 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.95■□□□□ 0.46
UBCP0CG48 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.95■□□□□ 0.46
UBCP0CG48 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBCP0CG48 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.95■□□□□ 0.46
UBCP0CG48 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBCP0CG48 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.95■□□□□ 0.46
UBCP0CG48 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
UBCP0CG48 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBCP0CG48 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
UBCP0CG48 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.94■□□□□ 0.46
UBCP0CG48 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBCP0CG48 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBCP0CG48 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBCP0CG48 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBCP0CG48 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBCP0CG48 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.94■□□□□ 0.46
UBCP0CG48 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.94■□□□□ 0.46
UBCP0CG48 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBCP0CG48 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBCP0CG48 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBCP0CG48 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
UBCP0CG48 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBCP0CG48 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBCP0CG48 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBCP0CG48 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
UBCP0CG48 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.94■□□□□ 0.46
UBCP0CG48 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBCP0CG48 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBCP0CG48 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
UBCP0CG48 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
UBCP0CG48 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBCP0CG48 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBCP0CG48 KRT16P2-201ENST00000414673 1423 ntBASIC17.93■□□□□ 0.46
UBCP0CG48 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
UBCP0CG48 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
UBCP0CG48 AC245052.3-201ENST00000450182 901 ntBASIC17.93■□□□□ 0.46
UBCP0CG48 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBCP0CG48 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.93■□□□□ 0.46
UBCP0CG48 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.93■□□□□ 0.46
UBCP0CG48 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.93■□□□□ 0.46
UBCP0CG48 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.93■□□□□ 0.46
UBCP0CG48 AC120498.10-201ENST00000621827 505 ntBASIC17.93■□□□□ 0.46
UBCP0CG48 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBCP0CG48 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBCP0CG48 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.93■□□□□ 0.46
UBCP0CG48 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBCP0CG48 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
UBCP0CG48 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
UBCP0CG48 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.92■□□□□ 0.46
UBCP0CG48 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.92■□□□□ 0.46
UBCP0CG48 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
UBCP0CG48 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
UBCP0CG48 NALT1-201ENST00000429224 738 ntTSL 5 BASIC17.92■□□□□ 0.46
UBCP0CG48 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBCP0CG48 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBCP0CG48 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
UBCP0CG48 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBCP0CG48 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.92■□□□□ 0.46
UBCP0CG48 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBCP0CG48 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.92■□□□□ 0.46
UBCP0CG48 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
UBCP0CG48 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBCP0CG48 AL162377.1-201ENST00000618844 1793 ntBASIC17.91■□□□□ 0.46
UBCP0CG48 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.91■□□□□ 0.46
UBCP0CG48 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBCP0CG48 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.91■□□□□ 0.46
UBCP0CG48 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
UBCP0CG48 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.91■□□□□ 0.46
UBCP0CG48 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBCP0CG48 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
UBCP0CG48 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UBCP0CG48 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.91■□□□□ 0.46
UBCP0CG48 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.91■□□□□ 0.46
UBCP0CG48 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms