Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDRT1O95170 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.26■□□□□ 0.51
CDRT1O95170 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDRT1O95170 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDRT1O95170 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDRT1O95170 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CDRT1O95170 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CDRT1O95170 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CDRT1O95170 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDRT1O95170 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.25■□□□□ 0.51
CDRT1O95170 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.25■□□□□ 0.51
CDRT1O95170 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CDRT1O95170 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CDRT1O95170 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDRT1O95170 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDRT1O95170 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDRT1O95170 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDRT1O95170 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDRT1O95170 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.25■□□□□ 0.51
CDRT1O95170 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDRT1O95170 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.24■□□□□ 0.51
CDRT1O95170 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.24■□□□□ 0.51
CDRT1O95170 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.24■□□□□ 0.51
CDRT1O95170 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDRT1O95170 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.24■□□□□ 0.51
CDRT1O95170 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDRT1O95170 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.24■□□□□ 0.51
CDRT1O95170 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDRT1O95170 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.24■□□□□ 0.51
CDRT1O95170 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.24■□□□□ 0.51
CDRT1O95170 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CDRT1O95170 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDRT1O95170 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDRT1O95170 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDRT1O95170 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CDRT1O95170 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDRT1O95170 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
CDRT1O95170 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDRT1O95170 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDRT1O95170 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDRT1O95170 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
CDRT1O95170 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDRT1O95170 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDRT1O95170 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.23■□□□□ 0.51
CDRT1O95170 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CDRT1O95170 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CDRT1O95170 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDRT1O95170 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDRT1O95170 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDRT1O95170 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.23■□□□□ 0.51
CDRT1O95170 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDRT1O95170 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDRT1O95170 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDRT1O95170 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.23■□□□□ 0.51
CDRT1O95170 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDRT1O95170 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.22■□□□□ 0.51
CDRT1O95170 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CDRT1O95170 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDRT1O95170 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDRT1O95170 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDRT1O95170 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.22■□□□□ 0.51
CDRT1O95170 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CDRT1O95170 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CDRT1O95170 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CDRT1O95170 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CDRT1O95170 TCF3P1-201ENST00000423021 1937 ntBASIC18.22■□□□□ 0.51
CDRT1O95170 AP000974.1-201ENST00000623909 2387 ntBASIC18.22■□□□□ 0.51
CDRT1O95170 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDRT1O95170 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDRT1O95170 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.22■□□□□ 0.51
CDRT1O95170 SERBP1P1-201ENST00000396021 1160 ntBASIC18.22■□□□□ 0.51
CDRT1O95170 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDRT1O95170 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.22■□□□□ 0.51
CDRT1O95170 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CDRT1O95170 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.22■□□□□ 0.51
CDRT1O95170 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDRT1O95170 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.22■□□□□ 0.51
CDRT1O95170 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CDRT1O95170 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDRT1O95170 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDRT1O95170 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDRT1O95170 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDRT1O95170 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDRT1O95170 SYT6-210ENST00000641643 1587 ntBASIC18.21■□□□□ 0.51
CDRT1O95170 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.21■□□□□ 0.51
CDRT1O95170 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDRT1O95170 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
CDRT1O95170 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CDRT1O95170 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CDRT1O95170 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDRT1O95170 AP006587.3-201ENST00000525742 1516 ntBASIC18.21■□□□□ 0.51
CDRT1O95170 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CDRT1O95170 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDRT1O95170 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.21■□□□□ 0.51
CDRT1O95170 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.21■□□□□ 0.51
CDRT1O95170 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.21■□□□□ 0.5
CDRT1O95170 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.21■□□□□ 0.5
CDRT1O95170 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CDRT1O95170 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDRT1O95170 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms