Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
ZNF253O75346 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC15.91■□□□□ 0.14
ZNF253O75346 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF253O75346 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF253O75346 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC15.91■□□□□ 0.14
ZNF253O75346 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC15.91■□□□□ 0.14
ZNF253O75346 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF253O75346 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF253O75346 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF253O75346 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF253O75346 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
ZNF253O75346 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF253O75346 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF253O75346 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC15.91■□□□□ 0.14
ZNF253O75346 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF253O75346 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF253O75346 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
ZNF253O75346 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF253O75346 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF253O75346 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC15.9■□□□□ 0.14
ZNF253O75346 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
ZNF253O75346 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF253O75346 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF253O75346 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC15.9■□□□□ 0.14
ZNF253O75346 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF253O75346 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF253O75346 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF253O75346 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF253O75346 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC15.9■□□□□ 0.14
ZNF253O75346 AC131281.2-201ENST00000520478 145 ntBASIC15.9■□□□□ 0.14
ZNF253O75346 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC15.9■□□□□ 0.14
ZNF253O75346 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC15.9■□□□□ 0.14
ZNF253O75346 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF253O75346 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF253O75346 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF253O75346 GABARAPL3-202ENST00000624044 1851 ntBASIC15.9■□□□□ 0.14
ZNF253O75346 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF253O75346 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF253O75346 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF253O75346 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
ZNF253O75346 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC15.89■□□□□ 0.14
ZNF253O75346 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF253O75346 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF253O75346 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF253O75346 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF253O75346 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF253O75346 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF253O75346 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC15.89■□□□□ 0.13
ZNF253O75346 ERF-202ENST00000440177 2032 ntTSL 2 BASIC15.89■□□□□ 0.13
ZNF253O75346 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF253O75346 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF253O75346 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF253O75346 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF253O75346 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF253O75346 FXN-202ENST00000396364 980 ntTSL 5 BASIC15.89■□□□□ 0.13
ZNF253O75346 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC15.89■□□□□ 0.13
ZNF253O75346 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF253O75346 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC15.89■□□□□ 0.13
ZNF253O75346 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC15.89■□□□□ 0.13
ZNF253O75346 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF253O75346 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC15.89■□□□□ 0.13
ZNF253O75346 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
ZNF253O75346 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
ZNF253O75346 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC15.89■□□□□ 0.13
ZNF253O75346 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF253O75346 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC15.89■□□□□ 0.13
ZNF253O75346 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC15.89■□□□□ 0.13
ZNF253O75346 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
ZNF253O75346 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ZNF253O75346 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ZNF253O75346 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ZNF253O75346 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
ZNF253O75346 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
ZNF253O75346 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ZNF253O75346 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ZNF253O75346 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ZNF253O75346 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
ZNF253O75346 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ZNF253O75346 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ZNF253O75346 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
ZNF253O75346 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ZNF253O75346 AICDA-202ENST00000537228 667 ntTSL 5 BASIC15.88■□□□□ 0.13
ZNF253O75346 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ZNF253O75346 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC15.88■□□□□ 0.13
ZNF253O75346 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ZNF253O75346 AC233992.3-201ENST00000607491 485 ntBASIC15.88■□□□□ 0.13
ZNF253O75346 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ZNF253O75346 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC15.88■□□□□ 0.13
ZNF253O75346 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ZNF253O75346 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ZNF253O75346 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ZNF253O75346 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ZNF253O75346 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
ZNF253O75346 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ZNF253O75346 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ZNF253O75346 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ZNF253O75346 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
ZNF253O75346 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
ZNF253O75346 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
ZNF253O75346 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms