Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.35■□□□□ 0.85
PCDHGA12O60330 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
PCDHGA12O60330 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PCDHGA12O60330 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
PCDHGA12O60330 AC080038.3-201ENST00000623346 1952 ntBASIC20.35■□□□□ 0.85
PCDHGA12O60330 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA12O60330 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA12O60330 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PCDHGA12O60330 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA12O60330 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PCDHGA12O60330 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.34■□□□□ 0.85
PCDHGA12O60330 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA12O60330 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA12O60330 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA12O60330 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
PCDHGA12O60330 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.34■□□□□ 0.85
PCDHGA12O60330 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA12O60330 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDHGA12O60330 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.34■□□□□ 0.85
PCDHGA12O60330 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA12O60330 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA12O60330 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.34■□□□□ 0.85
PCDHGA12O60330 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDHGA12O60330 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.34■□□□□ 0.85
PCDHGA12O60330 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
PCDHGA12O60330 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA12O60330 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGA12O60330 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.33■□□□□ 0.85
PCDHGA12O60330 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.33■□□□□ 0.85
PCDHGA12O60330 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGA12O60330 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.33■□□□□ 0.85
PCDHGA12O60330 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.33■□□□□ 0.85
PCDHGA12O60330 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGA12O60330 PNMA6B-201ENST00000538162 1200 ntBASIC20.33■□□□□ 0.85
PCDHGA12O60330 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGA12O60330 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.33■□□□□ 0.85
PCDHGA12O60330 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHGA12O60330 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHGA12O60330 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHGA12O60330 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.33■□□□□ 0.84
PCDHGA12O60330 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGA12O60330 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.32■□□□□ 0.84
PCDHGA12O60330 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
PCDHGA12O60330 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGA12O60330 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGA12O60330 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.32■□□□□ 0.84
PCDHGA12O60330 KRT17P3-201ENST00000420566 1262 ntBASIC20.32■□□□□ 0.84
PCDHGA12O60330 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.32■□□□□ 0.84
PCDHGA12O60330 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.32■□□□□ 0.84
PCDHGA12O60330 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.32■□□□□ 0.84
PCDHGA12O60330 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.32■□□□□ 0.84
PCDHGA12O60330 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGA12O60330 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.32■□□□□ 0.84
PCDHGA12O60330 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGA12O60330 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGA12O60330 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.32■□□□□ 0.84
PCDHGA12O60330 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGA12O60330 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGA12O60330 KRT18P68-201ENST00000392293 1000 ntBASIC20.31■□□□□ 0.84
PCDHGA12O60330 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGA12O60330 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PCDHGA12O60330 RPPH1-201ENST00000516869 333 ntBASIC20.31■□□□□ 0.84
PCDHGA12O60330 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.31■□□□□ 0.84
PCDHGA12O60330 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PCDHGA12O60330 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDHGA12O60330 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGA12O60330 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGA12O60330 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDHGA12O60330 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.31■□□□□ 0.84
PCDHGA12O60330 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
PCDHGA12O60330 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA12O60330 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA12O60330 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA12O60330 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA12O60330 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
PCDHGA12O60330 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA12O60330 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA12O60330 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHGA12O60330 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
PCDHGA12O60330 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.3■□□□□ 0.84
PCDHGA12O60330 FAM197Y4-202ENST00000622692 608 ntBASIC20.3■□□□□ 0.84
PCDHGA12O60330 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHGA12O60330 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHGA12O60330 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA12O60330 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA12O60330 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA12O60330 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA12O60330 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA12O60330 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
PCDHGA12O60330 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA12O60330 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
PCDHGA12O60330 AC092368.3-202ENST00000574180 1591 ntBASIC20.29■□□□□ 0.84
PCDHGA12O60330 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGA12O60330 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
PCDHGA12O60330 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
PCDHGA12O60330 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PCDHGA12O60330 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDHGA12O60330 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGA12O60330 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDHGA12O60330 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms