Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CNOT1A5YKK6 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNOT1A5YKK6 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.79■□□□□ 0.76
CNOT1A5YKK6 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.79■□□□□ 0.76
CNOT1A5YKK6 AL358472.4-201ENST00000633140 710 ntBASIC19.79■□□□□ 0.76
CNOT1A5YKK6 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNOT1A5YKK6 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNOT1A5YKK6 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNOT1A5YKK6 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.79■□□□□ 0.76
CNOT1A5YKK6 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.79■□□□□ 0.76
CNOT1A5YKK6 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CNOT1A5YKK6 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CNOT1A5YKK6 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNOT1A5YKK6 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNOT1A5YKK6 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNOT1A5YKK6 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.78■□□□□ 0.76
CNOT1A5YKK6 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CNOT1A5YKK6 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNOT1A5YKK6 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CNOT1A5YKK6 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNOT1A5YKK6 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.78■□□□□ 0.76
CNOT1A5YKK6 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.78■□□□□ 0.76
CNOT1A5YKK6 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNOT1A5YKK6 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.78■□□□□ 0.76
CNOT1A5YKK6 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNOT1A5YKK6 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC19.78■□□□□ 0.76
CNOT1A5YKK6 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNOT1A5YKK6 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CNOT1A5YKK6 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNOT1A5YKK6 CRYGFP-201ENST00000418459 633 ntBASIC19.78■□□□□ 0.76
CNOT1A5YKK6 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.78■□□□□ 0.76
CNOT1A5YKK6 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
CNOT1A5YKK6 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CNOT1A5YKK6 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CNOT1A5YKK6 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.77■□□□□ 0.76
CNOT1A5YKK6 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CNOT1A5YKK6 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CNOT1A5YKK6 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CNOT1A5YKK6 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CNOT1A5YKK6 AC087742.1-201ENST00000575880 1738 ntBASIC19.77■□□□□ 0.76
CNOT1A5YKK6 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CNOT1A5YKK6 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CNOT1A5YKK6 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CNOT1A5YKK6 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CNOT1A5YKK6 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CNOT1A5YKK6 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CNOT1A5YKK6 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CNOT1A5YKK6 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CNOT1A5YKK6 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.77■□□□□ 0.75
CNOT1A5YKK6 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNOT1A5YKK6 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CNOT1A5YKK6 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNOT1A5YKK6 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNOT1A5YKK6 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNOT1A5YKK6 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CNOT1A5YKK6 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CNOT1A5YKK6 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CNOT1A5YKK6 AP000525.1-201ENST00000608286 694 ntBASIC19.76■□□□□ 0.75
CNOT1A5YKK6 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CNOT1A5YKK6 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNOT1A5YKK6 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNOT1A5YKK6 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.76■□□□□ 0.75
CNOT1A5YKK6 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CNOT1A5YKK6 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.76■□□□□ 0.75
CNOT1A5YKK6 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.76■□□□□ 0.75
CNOT1A5YKK6 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNOT1A5YKK6 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
CNOT1A5YKK6 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CNOT1A5YKK6 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNOT1A5YKK6 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CNOT1A5YKK6 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.75■□□□□ 0.75
CNOT1A5YKK6 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNOT1A5YKK6 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.75■□□□□ 0.75
CNOT1A5YKK6 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.75■□□□□ 0.75
CNOT1A5YKK6 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.75■□□□□ 0.75
CNOT1A5YKK6 AC006557.6-201ENST00000623071 864 ntBASIC19.75■□□□□ 0.75
CNOT1A5YKK6 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CNOT1A5YKK6 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.75■□□□□ 0.75
CNOT1A5YKK6 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.75■□□□□ 0.75
CNOT1A5YKK6 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNOT1A5YKK6 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNOT1A5YKK6 NBPF21P-201ENST00000425093 1451 ntBASIC19.75■□□□□ 0.75
CNOT1A5YKK6 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.75■□□□□ 0.75
CNOT1A5YKK6 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNOT1A5YKK6 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNOT1A5YKK6 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.74■□□□□ 0.75
CNOT1A5YKK6 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.74■□□□□ 0.75
CNOT1A5YKK6 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.74■□□□□ 0.75
CNOT1A5YKK6 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.74■□□□□ 0.75
CNOT1A5YKK6 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNOT1A5YKK6 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNOT1A5YKK6 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNOT1A5YKK6 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.74■□□□□ 0.75
CNOT1A5YKK6 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNOT1A5YKK6 AK4P3-201ENST00000418260 669 ntBASIC19.74■□□□□ 0.75
CNOT1A5YKK6 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.74■□□□□ 0.75
CNOT1A5YKK6 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.74■□□□□ 0.75
CNOT1A5YKK6 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.74■□□□□ 0.75
CNOT1A5YKK6 AC139530.1-201ENST00000575312 1977 ntBASIC19.74■□□□□ 0.75
CNOT1A5YKK6 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms