Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRDV1A0A1B0GX56 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRDV1A0A1B0GX56 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
TRDV1A0A1B0GX56 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRDV1A0A1B0GX56 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
TRDV1A0A1B0GX56 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRDV1A0A1B0GX56 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRDV1A0A1B0GX56 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRDV1A0A1B0GX56 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRDV1A0A1B0GX56 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRDV1A0A1B0GX56 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.04■□□□□ 0.48
TRDV1A0A1B0GX56 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRDV1A0A1B0GX56 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TRDV1A0A1B0GX56 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRDV1A0A1B0GX56 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRDV1A0A1B0GX56 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRDV1A0A1B0GX56 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
TRDV1A0A1B0GX56 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.03■□□□□ 0.48
TRDV1A0A1B0GX56 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRDV1A0A1B0GX56 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRDV1A0A1B0GX56 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRDV1A0A1B0GX56 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.03■□□□□ 0.48
TRDV1A0A1B0GX56 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
TRDV1A0A1B0GX56 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.03■□□□□ 0.48
TRDV1A0A1B0GX56 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRDV1A0A1B0GX56 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRDV1A0A1B0GX56 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TRDV1A0A1B0GX56 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.03■□□□□ 0.48
TRDV1A0A1B0GX56 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.03■□□□□ 0.48
TRDV1A0A1B0GX56 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.03■□□□□ 0.48
TRDV1A0A1B0GX56 UNC93B8-201ENST00000511903 705 ntBASIC18.03■□□□□ 0.48
TRDV1A0A1B0GX56 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.03■□□□□ 0.48
TRDV1A0A1B0GX56 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.03■□□□□ 0.48
TRDV1A0A1B0GX56 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRDV1A0A1B0GX56 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
TRDV1A0A1B0GX56 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRDV1A0A1B0GX56 SYT6-210ENST00000641643 1587 ntBASIC18.03■□□□□ 0.48
TRDV1A0A1B0GX56 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRDV1A0A1B0GX56 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.03■□□□□ 0.48
TRDV1A0A1B0GX56 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRDV1A0A1B0GX56 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRDV1A0A1B0GX56 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TRDV1A0A1B0GX56 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRDV1A0A1B0GX56 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRDV1A0A1B0GX56 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRDV1A0A1B0GX56 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.02■□□□□ 0.48
TRDV1A0A1B0GX56 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.02■□□□□ 0.48
TRDV1A0A1B0GX56 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.02■□□□□ 0.48
TRDV1A0A1B0GX56 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRDV1A0A1B0GX56 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRDV1A0A1B0GX56 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
TRDV1A0A1B0GX56 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRDV1A0A1B0GX56 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.02■□□□□ 0.48
TRDV1A0A1B0GX56 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRDV1A0A1B0GX56 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRDV1A0A1B0GX56 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRDV1A0A1B0GX56 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
TRDV1A0A1B0GX56 AC055733.4-201ENST00000638462 1354 ntBASIC18.02■□□□□ 0.47
TRDV1A0A1B0GX56 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRDV1A0A1B0GX56 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.02■□□□□ 0.47
TRDV1A0A1B0GX56 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.01■□□□□ 0.47
TRDV1A0A1B0GX56 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRDV1A0A1B0GX56 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRDV1A0A1B0GX56 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRDV1A0A1B0GX56 AC009237.3-201ENST00000393279 1427 ntBASIC18.01■□□□□ 0.47
TRDV1A0A1B0GX56 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.01■□□□□ 0.47
TRDV1A0A1B0GX56 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TRDV1A0A1B0GX56 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.01■□□□□ 0.47
TRDV1A0A1B0GX56 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRDV1A0A1B0GX56 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TRDV1A0A1B0GX56 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRDV1A0A1B0GX56 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.01■□□□□ 0.47
TRDV1A0A1B0GX56 SLC47A1P1-202ENST00000449666 945 ntBASIC18.01■□□□□ 0.47
TRDV1A0A1B0GX56 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.01■□□□□ 0.47
TRDV1A0A1B0GX56 AL138724.1-201ENST00000606771 1088 ntBASIC18.01■□□□□ 0.47
TRDV1A0A1B0GX56 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.01■□□□□ 0.47
TRDV1A0A1B0GX56 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRDV1A0A1B0GX56 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.01■□□□□ 0.47
TRDV1A0A1B0GX56 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRDV1A0A1B0GX56 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRDV1A0A1B0GX56 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.01■□□□□ 0.47
TRDV1A0A1B0GX56 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRDV1A0A1B0GX56 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
TRDV1A0A1B0GX56 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
TRDV1A0A1B0GX56 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18■□□□□ 0.47
TRDV1A0A1B0GX56 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRDV1A0A1B0GX56 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
TRDV1A0A1B0GX56 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18■□□□□ 0.47
TRDV1A0A1B0GX56 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRDV1A0A1B0GX56 AC005332.7-201ENST00000614046 2005 ntBASIC18■□□□□ 0.47
TRDV1A0A1B0GX56 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18■□□□□ 0.47
TRDV1A0A1B0GX56 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18■□□□□ 0.47
TRDV1A0A1B0GX56 PTCHD3P2-201ENST00000424937 1205 ntBASIC18■□□□□ 0.47
TRDV1A0A1B0GX56 SRD5A1P1-201ENST00000442297 786 ntBASIC18■□□□□ 0.47
TRDV1A0A1B0GX56 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
TRDV1A0A1B0GX56 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18■□□□□ 0.47
TRDV1A0A1B0GX56 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC18■□□□□ 0.47
TRDV1A0A1B0GX56 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
TRDV1A0A1B0GX56 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
TRDV1A0A1B0GX56 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms