Protein–RNA interactions for Protein: A0A0K0K1A3

TRBV10-1, T-cell receptor beta variable 10-1(gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV10-1A0A0K0K1A3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV10-1A0A0K0K1A3 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC14.48□□□□□ -0.09
TRBV10-1A0A0K0K1A3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
TRBV10-1A0A0K0K1A3 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV10-1A0A0K0K1A3 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC14.48□□□□□ -0.09
TRBV10-1A0A0K0K1A3 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC14.48□□□□□ -0.09
TRBV10-1A0A0K0K1A3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV10-1A0A0K0K1A3 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
TRBV10-1A0A0K0K1A3 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV10-1A0A0K0K1A3 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
TRBV10-1A0A0K0K1A3 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC14.48□□□□□ -0.09
TRBV10-1A0A0K0K1A3 AC092720.2-201ENST00000602388 1665 ntBASIC14.48□□□□□ -0.09
TRBV10-1A0A0K0K1A3 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TRBV10-1A0A0K0K1A3 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TRBV10-1A0A0K0K1A3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV10-1A0A0K0K1A3 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV10-1A0A0K0K1A3 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC14.48□□□□□ -0.09
TRBV10-1A0A0K0K1A3 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV10-1A0A0K0K1A3 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV10-1A0A0K0K1A3 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC14.48□□□□□ -0.09
TRBV10-1A0A0K0K1A3 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC14.48□□□□□ -0.09
TRBV10-1A0A0K0K1A3 AIRN-201ENST00000601203 4374 ntBASIC14.48□□□□□ -0.09
TRBV10-1A0A0K0K1A3 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TRBV10-1A0A0K0K1A3 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV10-1A0A0K0K1A3 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV10-1A0A0K0K1A3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV10-1A0A0K0K1A3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV10-1A0A0K0K1A3 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV10-1A0A0K0K1A3 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV10-1A0A0K0K1A3 DET1-207ENST00000564406 2315 ntTSL 2 BASIC14.47□□□□□ -0.09
TRBV10-1A0A0K0K1A3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC14.47□□□□□ -0.09
TRBV10-1A0A0K0K1A3 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TRBV10-1A0A0K0K1A3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC14.47□□□□□ -0.09
TRBV10-1A0A0K0K1A3 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV10-1A0A0K0K1A3 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC14.47□□□□□ -0.09
TRBV10-1A0A0K0K1A3 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC14.47□□□□□ -0.09
TRBV10-1A0A0K0K1A3 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC14.47□□□□□ -0.09
TRBV10-1A0A0K0K1A3 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV10-1A0A0K0K1A3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
TRBV10-1A0A0K0K1A3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV10-1A0A0K0K1A3 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
TRBV10-1A0A0K0K1A3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV10-1A0A0K0K1A3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV10-1A0A0K0K1A3 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV10-1A0A0K0K1A3 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV10-1A0A0K0K1A3 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV10-1A0A0K0K1A3 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
TRBV10-1A0A0K0K1A3 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV10-1A0A0K0K1A3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV10-1A0A0K0K1A3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TRBV10-1A0A0K0K1A3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV10-1A0A0K0K1A3 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC14.46□□□□□ -0.09
TRBV10-1A0A0K0K1A3 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TRBV10-1A0A0K0K1A3 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TRBV10-1A0A0K0K1A3 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TRBV10-1A0A0K0K1A3 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV10-1A0A0K0K1A3 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
TRBV10-1A0A0K0K1A3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV10-1A0A0K0K1A3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV10-1A0A0K0K1A3 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
TRBV10-1A0A0K0K1A3 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV10-1A0A0K0K1A3 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV10-1A0A0K0K1A3 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV10-1A0A0K0K1A3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC14.46□□□□□ -0.09
TRBV10-1A0A0K0K1A3 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV10-1A0A0K0K1A3 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TRBV10-1A0A0K0K1A3 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV10-1A0A0K0K1A3 PTPA-214ENST00000423100 988 ntTSL 2 BASIC14.46□□□□□ -0.09
TRBV10-1A0A0K0K1A3 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV10-1A0A0K0K1A3 STOX2-205ENST00000513034 807 ntTSL 3 BASIC14.46□□□□□ -0.09
TRBV10-1A0A0K0K1A3 AP001160.3-201ENST00000601484 763 ntBASIC14.46□□□□□ -0.09
TRBV10-1A0A0K0K1A3 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV10-1A0A0K0K1A3 AL162377.1-201ENST00000618844 1793 ntBASIC14.46□□□□□ -0.09
TRBV10-1A0A0K0K1A3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV10-1A0A0K0K1A3 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC14.46□□□□□ -0.09
TRBV10-1A0A0K0K1A3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC14.46□□□□□ -0.09
TRBV10-1A0A0K0K1A3 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRBV10-1A0A0K0K1A3 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRBV10-1A0A0K0K1A3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRBV10-1A0A0K0K1A3 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TRBV10-1A0A0K0K1A3 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC14.46□□□□□ -0.1
TRBV10-1A0A0K0K1A3 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV10-1A0A0K0K1A3 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV10-1A0A0K0K1A3 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV10-1A0A0K0K1A3 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV10-1A0A0K0K1A3 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV10-1A0A0K0K1A3 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV10-1A0A0K0K1A3 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV10-1A0A0K0K1A3 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV10-1A0A0K0K1A3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC14.45□□□□□ -0.1
TRBV10-1A0A0K0K1A3 SLC7A5P1-201ENST00000568957 537 ntBASIC14.45□□□□□ -0.1
TRBV10-1A0A0K0K1A3 AC104187.1-201ENST00000607510 612 ntBASIC14.45□□□□□ -0.1
TRBV10-1A0A0K0K1A3 AC243732.1-201ENST00000612648 864 ntBASIC14.45□□□□□ -0.1
TRBV10-1A0A0K0K1A3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV10-1A0A0K0K1A3 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC14.45□□□□□ -0.1
TRBV10-1A0A0K0K1A3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV10-1A0A0K0K1A3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV10-1A0A0K0K1A3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV10-1A0A0K0K1A3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
TRBV10-1A0A0K0K1A3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms