Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAV41A0A0B4J266 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV41A0A0B4J266 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV41A0A0B4J266 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TRAV41A0A0B4J266 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV41A0A0B4J266 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.16■□□□□ 0.18
TRAV41A0A0B4J266 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV41A0A0B4J266 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV41A0A0B4J266 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAV41A0A0B4J266 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TRAV41A0A0B4J266 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TRAV41A0A0B4J266 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV41A0A0B4J266 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV41A0A0B4J266 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV41A0A0B4J266 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV41A0A0B4J266 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV41A0A0B4J266 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV41A0A0B4J266 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
TRAV41A0A0B4J266 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV41A0A0B4J266 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAV41A0A0B4J266 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.15■□□□□ 0.18
TRAV41A0A0B4J266 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV41A0A0B4J266 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC16.15■□□□□ 0.18
TRAV41A0A0B4J266 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV41A0A0B4J266 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16.15■□□□□ 0.18
TRAV41A0A0B4J266 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV41A0A0B4J266 AC105036.2-201ENST00000569468 176 ntBASIC16.15■□□□□ 0.18
TRAV41A0A0B4J266 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV41A0A0B4J266 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.15■□□□□ 0.18
TRAV41A0A0B4J266 AL121832.2-201ENST00000610979 668 ntBASIC16.15■□□□□ 0.18
TRAV41A0A0B4J266 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV41A0A0B4J266 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV41A0A0B4J266 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV41A0A0B4J266 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV41A0A0B4J266 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC16.14■□□□□ 0.17
TRAV41A0A0B4J266 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.14■□□□□ 0.17
TRAV41A0A0B4J266 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC16.14■□□□□ 0.17
TRAV41A0A0B4J266 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV41A0A0B4J266 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV41A0A0B4J266 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV41A0A0B4J266 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV41A0A0B4J266 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV41A0A0B4J266 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV41A0A0B4J266 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC16.14■□□□□ 0.17
TRAV41A0A0B4J266 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAV41A0A0B4J266 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV41A0A0B4J266 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.14■□□□□ 0.17
TRAV41A0A0B4J266 GXYLT1P5-201ENST00000614548 1189 ntBASIC16.14■□□□□ 0.17
TRAV41A0A0B4J266 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.14■□□□□ 0.17
TRAV41A0A0B4J266 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV41A0A0B4J266 PLK5-205ENST00000642079 1969 ntBASIC16.14■□□□□ 0.17
TRAV41A0A0B4J266 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV41A0A0B4J266 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV41A0A0B4J266 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TRAV41A0A0B4J266 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV41A0A0B4J266 ERF-202ENST00000440177 2032 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAV41A0A0B4J266 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV41A0A0B4J266 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TRAV41A0A0B4J266 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TRAV41A0A0B4J266 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.13■□□□□ 0.17
TRAV41A0A0B4J266 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV41A0A0B4J266 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC16.13■□□□□ 0.17
TRAV41A0A0B4J266 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAV41A0A0B4J266 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAV41A0A0B4J266 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC16.13■□□□□ 0.17
TRAV41A0A0B4J266 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV41A0A0B4J266 AL512625.2-201ENST00000417533 625 ntBASIC16.13■□□□□ 0.17
TRAV41A0A0B4J266 NCF1B-203ENST00000435988 1254 ntBASIC16.13■□□□□ 0.17
TRAV41A0A0B4J266 AC083906.2-201ENST00000511578 360 ntBASIC16.13■□□□□ 0.17
TRAV41A0A0B4J266 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.13■□□□□ 0.17
TRAV41A0A0B4J266 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV41A0A0B4J266 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAV41A0A0B4J266 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.13■□□□□ 0.17
TRAV41A0A0B4J266 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC16.13■□□□□ 0.17
TRAV41A0A0B4J266 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV41A0A0B4J266 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TRAV41A0A0B4J266 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16.13■□□□□ 0.17
TRAV41A0A0B4J266 AC006128.1-201ENST00000624704 1661 ntBASIC16.13■□□□□ 0.17
TRAV41A0A0B4J266 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAV41A0A0B4J266 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV41A0A0B4J266 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV41A0A0B4J266 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
TRAV41A0A0B4J266 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
TRAV41A0A0B4J266 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.13■□□□□ 0.17
TRAV41A0A0B4J266 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TRAV41A0A0B4J266 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC16.13■□□□□ 0.17
TRAV41A0A0B4J266 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TRAV41A0A0B4J266 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV41A0A0B4J266 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV41A0A0B4J266 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAV41A0A0B4J266 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
TRAV41A0A0B4J266 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV41A0A0B4J266 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV41A0A0B4J266 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TRAV41A0A0B4J266 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV41A0A0B4J266 GPX1P1-201ENST00000388829 606 ntBASIC16.12■□□□□ 0.17
TRAV41A0A0B4J266 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV41A0A0B4J266 PGM5P4-201ENST00000421970 445 ntBASIC16.12■□□□□ 0.17
TRAV41A0A0B4J266 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAV41A0A0B4J266 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms