Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TRBV5-3A0A0A0MS03 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRBV5-3A0A0A0MS03 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRBV5-3A0A0A0MS03 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.26■□□□□ 0.67
TRBV5-3A0A0A0MS03 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRBV5-3A0A0A0MS03 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.26■□□□□ 0.67
TRBV5-3A0A0A0MS03 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.26■□□□□ 0.67
TRBV5-3A0A0A0MS03 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRBV5-3A0A0A0MS03 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.26■□□□□ 0.67
TRBV5-3A0A0A0MS03 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRBV5-3A0A0A0MS03 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.26■□□□□ 0.67
TRBV5-3A0A0A0MS03 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRBV5-3A0A0A0MS03 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.26■□□□□ 0.67
TRBV5-3A0A0A0MS03 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRBV5-3A0A0A0MS03 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.26■□□□□ 0.67
TRBV5-3A0A0A0MS03 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV5-3A0A0A0MS03 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.25■□□□□ 0.67
TRBV5-3A0A0A0MS03 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TRBV5-3A0A0A0MS03 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
TRBV5-3A0A0A0MS03 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV5-3A0A0A0MS03 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV5-3A0A0A0MS03 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
TRBV5-3A0A0A0MS03 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV5-3A0A0A0MS03 AC116050.2-201ENST00000612102 1779 ntBASIC19.25■□□□□ 0.67
TRBV5-3A0A0A0MS03 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV5-3A0A0A0MS03 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV5-3A0A0A0MS03 IRS3P-201ENST00000223076 1006 ntBASIC19.25■□□□□ 0.67
TRBV5-3A0A0A0MS03 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TRBV5-3A0A0A0MS03 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.25■□□□□ 0.67
TRBV5-3A0A0A0MS03 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV5-3A0A0A0MS03 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV5-3A0A0A0MS03 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
TRBV5-3A0A0A0MS03 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV5-3A0A0A0MS03 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV5-3A0A0A0MS03 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV5-3A0A0A0MS03 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV5-3A0A0A0MS03 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV5-3A0A0A0MS03 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV5-3A0A0A0MS03 AC125437.2-201ENST00000625180 2167 ntBASIC19.25■□□□□ 0.67
TRBV5-3A0A0A0MS03 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.24■□□□□ 0.67
TRBV5-3A0A0A0MS03 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV5-3A0A0A0MS03 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.24■□□□□ 0.67
TRBV5-3A0A0A0MS03 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.24■□□□□ 0.67
TRBV5-3A0A0A0MS03 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV5-3A0A0A0MS03 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV5-3A0A0A0MS03 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV5-3A0A0A0MS03 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.24■□□□□ 0.67
TRBV5-3A0A0A0MS03 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.24■□□□□ 0.67
TRBV5-3A0A0A0MS03 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.24■□□□□ 0.67
TRBV5-3A0A0A0MS03 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.24■□□□□ 0.67
TRBV5-3A0A0A0MS03 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.24■□□□□ 0.67
TRBV5-3A0A0A0MS03 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.24■□□□□ 0.67
TRBV5-3A0A0A0MS03 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.24■□□□□ 0.67
TRBV5-3A0A0A0MS03 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV5-3A0A0A0MS03 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV5-3A0A0A0MS03 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.24■□□□□ 0.67
TRBV5-3A0A0A0MS03 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV5-3A0A0A0MS03 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV5-3A0A0A0MS03 SMG8-203ENST00000578922 2178 ntBASIC19.23■□□□□ 0.67
TRBV5-3A0A0A0MS03 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.23■□□□□ 0.67
TRBV5-3A0A0A0MS03 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV5-3A0A0A0MS03 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.23■□□□□ 0.67
TRBV5-3A0A0A0MS03 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV5-3A0A0A0MS03 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV5-3A0A0A0MS03 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV5-3A0A0A0MS03 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TRBV5-3A0A0A0MS03 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV5-3A0A0A0MS03 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV5-3A0A0A0MS03 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV5-3A0A0A0MS03 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.23■□□□□ 0.67
TRBV5-3A0A0A0MS03 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV5-3A0A0A0MS03 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.23■□□□□ 0.67
TRBV5-3A0A0A0MS03 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
TRBV5-3A0A0A0MS03 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.23■□□□□ 0.67
TRBV5-3A0A0A0MS03 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV5-3A0A0A0MS03 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV5-3A0A0A0MS03 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV5-3A0A0A0MS03 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.23■□□□□ 0.67
TRBV5-3A0A0A0MS03 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV5-3A0A0A0MS03 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
TRBV5-3A0A0A0MS03 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
TRBV5-3A0A0A0MS03 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV5-3A0A0A0MS03 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.22■□□□□ 0.67
TRBV5-3A0A0A0MS03 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TRBV5-3A0A0A0MS03 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV5-3A0A0A0MS03 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV5-3A0A0A0MS03 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV5-3A0A0A0MS03 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.22■□□□□ 0.67
TRBV5-3A0A0A0MS03 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.22■□□□□ 0.67
TRBV5-3A0A0A0MS03 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV5-3A0A0A0MS03 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.22■□□□□ 0.67
TRBV5-3A0A0A0MS03 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.22■□□□□ 0.67
TRBV5-3A0A0A0MS03 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.22■□□□□ 0.67
TRBV5-3A0A0A0MS03 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
TRBV5-3A0A0A0MS03 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.22■□□□□ 0.67
TRBV5-3A0A0A0MS03 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV5-3A0A0A0MS03 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV5-3A0A0A0MS03 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.22■□□□□ 0.67
TRBV5-3A0A0A0MS03 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV5-3A0A0A0MS03 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms