Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 AKR1E2-204ENST00000441590 488 ntTSL 311.04□□□□□ -0.647e-7■■■□□ 14.6
PRPF8Q6P2Q9 LAMA5-203ENST00000370691 3160 ntTSL 1 (best)10.81□□□□□ -0.685e-12■■■□□ 14.6
PRPF8Q6P2Q9 MND1-205ENST00000509752 844 ntTSL 310.61□□□□□ -0.717e-7■■■□□ 14.6
PRPF8Q6P2Q9 ADGRE2-203ENST00000392962 1497 ntTSL 210.31□□□□□ -0.767e-7■■■□□ 14.6
PRPF8Q6P2Q9 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC10.16□□□□□ -0.781e-7■■■□□ 14.6
PRPF8Q6P2Q9 BCCIP-201ENST00000278100 1236 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.821e-7■■■□□ 14.6
PRPF8Q6P2Q9 AKR1E2-202ENST00000334019 1036 ntTSL 1 (best) BASIC9.81□□□□□ -0.847e-7■■■□□ 14.6
PRPF8Q6P2Q9 ADGRE2-205ENST00000594076 2193 ntTSL 5 BASIC9.8□□□□□ -0.847e-7■■■□□ 14.6
PRPF8Q6P2Q9 ADGRE2-204ENST00000392965 2513 ntAPPRIS ALT2 TSL 2 BASIC9.71□□□□□ -0.867e-7■■■□□ 14.6
PRPF8Q6P2Q9 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC9.54□□□□□ -0.887e-7■■■□□ 14.6
PRPF8Q6P2Q9 ADGRE2-206ENST00000594294 2325 ntTSL 5 BASIC9.5□□□□□ -0.897e-7■■■□□ 14.6
PRPF8Q6P2Q9 ADGRE2-209ENST00000596991 2596 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.97e-7■■■□□ 14.6
PRPF8Q6P2Q9 POR-207ENST00000426184 565 ntTSL 49.19□□□□□ -0.944e-7■■■□□ 14.6
PRPF8Q6P2Q9 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.967e-7■■■□□ 14.6
PRPF8Q6P2Q9 POR-220ENST00000475509 590 ntTSL 59□□□□□ -0.974e-7■■■□□ 14.6
PRPF8Q6P2Q9 LINC00174-203ENST00000416572 556 ntTSL 48.86□□□□□ -0.997e-7■■■□□ 14.6
PRPF8Q6P2Q9 AL359873.1-201ENST00000447908 764 ntTSL 3 BASIC8.69□□□□□ -1.027e-7■■■□□ 14.6
PRPF8Q6P2Q9 MND1-206ENST00000622785 830 ntTSL 2 BASIC8.65□□□□□ -1.037e-7■■■□□ 14.6
PRPF8Q6P2Q9 ADGRE2-202ENST00000360222 3330 ntTSL 28.39□□□□□ -1.077e-7■■■□□ 14.6
PRPF8Q6P2Q9 MND1-201ENST00000240488 968 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.117e-7■■■□□ 14.6
PRPF8Q6P2Q9 CCAR1-202ENST00000398676 565 ntTSL 37.78□□□□□ -1.167e-7■■■□□ 14.6
PRPF8Q6P2Q9 MND1-204ENST00000508731 502 ntTSL 37.69□□□□□ -1.187e-7■■■□□ 14.6
PRPF8Q6P2Q9 ADGRE2-201ENST00000315576 6767 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.197e-7■■■□□ 14.6
PRPF8Q6P2Q9 LCP1-203ENST00000416500 819 ntTSL 37.53□□□□□ -1.27e-7■■■□□ 14.6
PRPF8Q6P2Q9 AKR1E2-203ENST00000345253 913 ntTSL 1 (best) BASIC7.38□□□□□ -1.237e-7■■■□□ 14.6
PRPF8Q6P2Q9 ADGRE2-212ENST00000601345 3128 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.237e-7■■■□□ 14.6
PRPF8Q6P2Q9 AKR1E2-208ENST00000487985 381 ntTSL 36.14□□□□□ -1.437e-7■■■□□ 14.6
PRPF8Q6P2Q9 AC005363.1-201ENST00000530779 351 ntBASIC5.93□□□□□ -1.467e-7■■■□□ 14.6
PRPF8Q6P2Q9 RCOR3-213ENST00000529763 720 ntTSL 55.75□□□□□ -1.497e-7■■■□□ 14.6
PRPF8Q6P2Q9 VPS11-201ENST00000524454 626 ntTSL 25.74□□□□□ -1.497e-7■■■□□ 14.6
PRPF8Q6P2Q9 UQCRB-205ENST00000518876 3968 ntTSL 1 (best)5.32□□□□□ -1.567e-7■■■□□ 14.6
PRPF8Q6P2Q9 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.31□□□□□ -1.567e-7■■■□□ 14.6
PRPF8Q6P2Q9 UQCRB-206ENST00000519322 750 ntTSL 25.31□□□□□ -1.567e-7■■■□□ 14.6
PRPF8Q6P2Q9 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.647e-7■■■□□ 14.6
PRPF8Q6P2Q9 MTMR1-213ENST00000493995 700 ntTSL 54.77□□□□□ -1.657e-7■■■□□ 14.6
PRPF8Q6P2Q9 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.687e-7■■■□□ 14.6
PRPF8Q6P2Q9 BRCA1-206ENST00000461574 726 ntTSL 24.54□□□□□ -1.687e-7■■■□□ 14.6
PRPF8Q6P2Q9 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.52□□□□□ -1.697e-7■■■□□ 14.6
PRPF8Q6P2Q9 UQCRB-207ENST00000521036 982 ntTSL 24.38□□□□□ -1.717e-7■■■□□ 14.6
PRPF8Q6P2Q9 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.717e-7■■■□□ 14.6
PRPF8Q6P2Q9 MTMR1-206ENST00000438018 397 ntTSL 54.28□□□□□ -1.727e-7■■■□□ 14.6
PRPF8Q6P2Q9 MTMR1-203ENST00000429965 564 ntTSL 54.14□□□□□ -1.757e-7■■■□□ 14.6
PRPF8Q6P2Q9 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.767e-7■■■□□ 14.6
PRPF8Q6P2Q9 MTMR1-205ENST00000436701 448 ntTSL 53.93□□□□□ -1.787e-7■■■□□ 14.6
PRPF8Q6P2Q9 RCOR3-207ENST00000486666 4086 ntTSL 23.65□□□□□ -1.827e-7■■■□□ 14.6
PRPF8Q6P2Q9 MTMR1-204ENST00000434699 549 ntTSL 53.47□□□□□ -1.857e-7■■■□□ 14.6
PRPF8Q6P2Q9 RCOR3-209ENST00000528066 569 ntTSL 33.39□□□□□ -1.877e-7■■■□□ 14.6
PRPF8Q6P2Q9 MTMR1-207ENST00000439546 573 ntTSL 43.35□□□□□ -1.877e-7■■■□□ 14.6
PRPF8Q6P2Q9 UQCRB-203ENST00000517603 1041 ntTSL 1 (best)3.33□□□□□ -1.887e-7■■■□□ 14.6
PRPF8Q6P2Q9 UQCRB-208ENST00000521948 997 ntTSL 23.15□□□□□ -1.97e-7■■■□□ 14.6
PRPF8Q6P2Q9 TRIM4-205ENST00000496896 601 ntTSL 52.25□□□□□ -2.051e-13■■■□□ 14.6
PRPF8Q6P2Q9 RCOR3-215ENST00000534460 427 ntTSL 31.9□□□□□ -2.117e-7■■■□□ 14.6
PRPF8Q6P2Q9 BRCA1-229ENST00000621897 375 ntTSL 51.35□□□□□ -2.197e-7■■■□□ 14.6
PRPF8Q6P2Q9 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC1.17□□□□□ -2.227e-7■■■□□ 14.6
PRPF8Q6P2Q9 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.16□□□□□ -2.227e-7■■■□□ 14.6
PRPF8Q6P2Q9 CAPRIN1-214ENST00000533641 429 ntTSL 40.98□□□□□ -2.256e-10■■■□□ 14.6
PRPF8Q6P2Q9 RCOR3-206ENST00000485186 434 ntTSL 30.25□□□□□ -2.377e-7■■■□□ 14.6
PRPF8Q6P2Q9 CCAR1-216ENST00000543706 869 ntTSL 5-0.38□□□□□ -2.477e-7■■■□□ 14.6
PRPF8Q6P2Q9 MND1-202ENST00000503967 301 ntTSL 5-1.14□□□□□ -2.597e-7■■■□□ 14.6
PRPF8Q6P2Q9 COASY-213ENST00000591753 2225 ntTSL 1 (best)13.19□□□□□ -0.31e-8■■■□□ 14.6
PRPF8Q6P2Q9 CSAD-206ENST00000424990 565 ntTSL 412.38□□□□□ -0.431e-8■■■□□ 14.6
PRPF8Q6P2Q9 CSAD-207ENST00000437073 581 ntTSL 412.36□□□□□ -0.431e-8■■■□□ 14.6
PRPF8Q6P2Q9 PRMT5-212ENST00000553787 579 ntTSL 415.97■□□□□ 0.158e-8■■■□□ 14.6
PRPF8Q6P2Q9 PRMT5-211ENST00000553641 800 ntTSL 39.91□□□□□ -0.828e-8■■■□□ 14.6
PRPF8Q6P2Q9 TRAP1-204ENST00000570514 412 ntTSL 27.9□□□□□ -1.145e-8■■■□□ 14.6
PRPF8Q6P2Q9 ZFR-203ENST00000505204 552 ntTSL 410.21□□□□□ -0.776e-10■■■□□ 14.6
PRPF8Q6P2Q9 MST1-220ENST00000497359 1917 ntTSL 517.5■□□□□ 0.393e-7■■■□□ 14.6
PRPF8Q6P2Q9 MST1-204ENST00000479115 2285 ntTSL 515.19■□□□□ 0.023e-7■■■□□ 14.6
PRPF8Q6P2Q9 MST1-218ENST00000494809 859 ntTSL 313.59□□□□□ -0.233e-7■■■□□ 14.6
PRPF8Q6P2Q9 MST1-212ENST00000489007 737 ntTSL 313.04□□□□□ -0.323e-7■■■□□ 14.6
PRPF8Q6P2Q9 C5orf24-203ENST00000435259 851 ntAPPRIS P1 TSL 3 BASIC8.46□□□□□ -1.051e-10■■■□□ 14.6
PRPF8Q6P2Q9 SLC26A11-216ENST00000576126 472 ntTSL 313.75□□□□□ -0.212e-6■■■□□ 14.6
PRPF8Q6P2Q9 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.595e-8■■■□□ 14.6
PRPF8Q6P2Q9 BCAM-202ENST00000588303 914 ntTSL 317.96■□□□□ 0.475e-24■■■□□ 14.6
PRPF8Q6P2Q9 GPS1-217ENST00000583009 574 ntTSL 410.55□□□□□ -0.721e-7■■■□□ 14.6
PRPF8Q6P2Q9 NFE2L2-210ENST00000462023 521 ntTSL 213.42□□□□□ -0.265e-17■■■□□ 14.6
PRPF8Q6P2Q9 NFE2L2-214ENST00000588123 814 ntTSL 58.04□□□□□ -1.125e-17■■■□□ 14.6
PRPF8Q6P2Q9 CIRBP-223ENST00000589266 616 ntTSL 320.99■□□□□ 0.953e-14■■■□□ 14.6
PRPF8Q6P2Q9 CIRBP-219ENST00000588411 619 ntTSL 518.62■□□□□ 0.573e-14■■■□□ 14.6
PRPF8Q6P2Q9 PACS2-211ENST00000551692 3453 ntTSL 211.13□□□□□ -0.632e-6■■■□□ 14.6
PRPF8Q6P2Q9 RPS21-202ENST00000370562 1002 ntTSL 2 BASIC10.49□□□□□ -0.731e-15■■■□□ 14.6
PRPF8Q6P2Q9 GTPBP4-203ENST00000483839 596 ntTSL 28.29□□□□□ -1.082e-7■■■□□ 14.6
PRPF8Q6P2Q9 SLC2A4RG-204ENST00000482718 541 ntTSL 222.71■■□□□ 1.234e-23■■■□□ 14.6
PRPF8Q6P2Q9 ZC3H18-204ENST00000564161 4654 ntTSL 211.89□□□□□ -0.511e-7■■■□□ 14.6
PRPF8Q6P2Q9 SHANK2-213ENST00000460048 736 ntTSL 514.13□□□□□ -0.151e-6■■■□□ 14.6
PRPF8Q6P2Q9 PNPLA2-205ENST00000531923 637 ntTSL 219.46■□□□□ 0.711e-13■■■□□ 14.6
PRPF8Q6P2Q9 GANAB-214ENST00000534613 737 ntTSL 514.1□□□□□ -0.153e-7■■■□□ 14.6
PRPF8Q6P2Q9 GANAB-204ENST00000525994 390 ntTSL 413.44□□□□□ -0.261e-8■■■□□ 14.6
PRPF8Q6P2Q9 GOLGA3-207ENST00000545875 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.984e-7■■■□□ 14.6
PRPF8Q6P2Q9 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.3□□□□□ -0.121e-7■■■□□ 14.6
PRPF8Q6P2Q9 POLR3E-204ENST00000561494 575 ntTSL 318.13■□□□□ 0.491e-6■■■□□ 14.6
PRPF8Q6P2Q9 POLR3E-212ENST00000564883 560 ntTSL 416.02■□□□□ 0.151e-6■■■□□ 14.6
PRPF8Q6P2Q9 U2AF1L5-211ENST00000637320 1678 ntTSL 220.03■□□□□ 0.81e-9■■■□□ 14.6
PRPF8Q6P2Q9 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.59■□□□□ 0.731e-9■■■□□ 14.6
PRPF8Q6P2Q9 LTBR-210ENST00000542830 539 ntTSL 414.94□□□□□ -0.021e-9■■■□□ 14.6
PRPF8Q6P2Q9 CHRD-213ENST00000482014 560 ntTSL 414.34□□□□□ -0.111e-9■■■□□ 14.6
PRPF8Q6P2Q9 LTBR-215ENST00000546296 783 ntTSL 413.96□□□□□ -0.181e-9■■■□□ 14.6
PRPF8Q6P2Q9 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.223e-6■■■□□ 14.6
PRPF8Q6P2Q9 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.223e-6■■■□□ 14.6
PRPF8Q6P2Q9 CSF3R-214ENST00000526980 928 ntTSL 312.3□□□□□ -0.441e-9■■■□□ 14.6
Retrieved 100 of 73,762 protein–RNA pairs in 1664 ms