RNA–Protein interactions for RNA: ENST00000416500.5

LCP1-203, Transcript of lymphocyte cytosolic protein 1, humanhuman

TSL 3

Gene LCP1, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCP1-203ENST00000416500 AEBP2Q6ZN18 517 aaPredicted RBP25.53■■□□□ 1.68
LCP1-203ENST00000416500 CHIC1Q5VXU3 224 aa24.78■■□□□ 1.56
LCP1-203ENST00000416500 SENP3Q9H4L4 574 aaPredicted RBP21.8■■□□□ 1.08
LCP1-203ENST00000416500 PHF23Q9BUL5 403 aaPredicted RBP21.71■■□□□ 1.07
LCP1-203ENST00000416500 NISCHQ9Y2I1 1504 aa21.55■■□□□ 1.04
LCP1-203ENST00000416500 FOXD1Q16676 465 aa20.2■□□□□ 0.82
LCP1-203ENST00000416500 PLPPR3Q6T4P5 718 aa20.08■□□□□ 0.81
LCP1-203ENST00000416500 ADRA2BP18089 450 aa19.25■□□□□ 0.67
LCP1-203ENST00000416500 PPP6R1Q9UPN7 881 aa19.24■□□□□ 0.67
LCP1-203ENST00000416500 CCDC180Q9P1Z9 1646 aa19.07■□□□□ 0.64
LCP1-203ENST00000416500 PIAS4Q8N2W9 510 aaPredicted RBP19.05■□□□□ 0.64
LCP1-203ENST00000416500 MSH5O43196 834 aa18.78■□□□□ 0.6
LCP1-203ENST00000416500 ABCC9O60706 1549 aa18.62■□□□□ 0.57
LCP1-203ENST00000416500 DCAF8L2P0C7V8 631 aa17.99■□□□□ 0.47
LCP1-203ENST00000416500 ZCCHC6Q5VYS8 1495 aaKnown RBP17.96■□□□□ 0.47
LCP1-203ENST00000416500 NACADO15069 1562 aa17.91■□□□□ 0.46
LCP1-203ENST00000416500 RB1CC1Q8TDY2 1594 aa17.9■□□□□ 0.46
LCP1-203ENST00000416500 MYO15BQ96JP2 1530 aa17.82■□□□□ 0.44
LCP1-203ENST00000416500 DCAF1Q9Y4B6 1507 aa17.8■□□□□ 0.44
LCP1-203ENST00000416500 SCAF1Q9H7N4 1312 aaKnown RBP17.72■□□□□ 0.43
LCP1-203ENST00000416500 PPP4R3CPQ6ZMV5 832 aa17.64■□□□□ 0.41
LCP1-203ENST00000416500 UNC13AQ9UPW8 1703 aa17.58■□□□□ 0.4
LCP1-203ENST00000416500 MAPK8IP2Q13387 824 aaPredicted RBP17.51■□□□□ 0.39
LCP1-203ENST00000416500 SCRIBQ14160 1630 aa17.46■□□□□ 0.39
LCP1-203ENST00000416500 PABPN1Q86U42 306 aaKnown RBP eCLIP17.45■□□□□ 0.38
LCP1-203ENST00000416500 POTEDQ86YR6 584 aa17.43■□□□□ 0.38
LCP1-203ENST00000416500 BICRAQ9NZM4 1560 aa17.42■□□□□ 0.38
LCP1-203ENST00000416500 DMRT2Q9Y5R5 561 aa17.33■□□□□ 0.36
LCP1-203ENST00000416500 CNKSR2Q8WXI2 1034 aa17.21■□□□□ 0.35
LCP1-203ENST00000416500 NCBP3Q53F19 620 aaKnown RBP17.18■□□□□ 0.34
LCP1-203ENST00000416500 SHROOM4Q9ULL8 1493 aa17.14■□□□□ 0.33
LCP1-203ENST00000416500 DNAJC5BQ9UF47 199 aa17.07■□□□□ 0.32
LCP1-203ENST00000416500 KCNA4P22459 653 aa16.95■□□□□ 0.3
LCP1-203ENST00000416500 RNF216Q9NWF9 866 aaPredicted RBP16.92■□□□□ 0.3
LCP1-203ENST00000416500 EIF4G1Q04637 1599 aaKnown RBP16.92■□□□□ 0.3
LCP1-203ENST00000416500 HOXD11P31277 338 aaPredicted RBP16.88■□□□□ 0.29
LCP1-203ENST00000416500 CC2D2AQ9P2K1 1620 aa16.84■□□□□ 0.29
LCP1-203ENST00000416500 NPM3O75607 178 aaKnown RBP16.83■□□□□ 0.28
LCP1-203ENST00000416500 CECR2Q9BXF3 1484 aa16.83■□□□□ 0.28
LCP1-203ENST00000416500 SMARCA4P51532 1647 aa16.7■□□□□ 0.26
LCP1-203ENST00000416500 DCAF8L1A6NGE4 600 aa16.67■□□□□ 0.26
LCP1-203ENST00000416500 BAZ1AQ9NRL2 1556 aaPredicted RBP16.66■□□□□ 0.26
LCP1-203ENST00000416500 MROH2BQ7Z745 1585 aa16.64■□□□□ 0.25
LCP1-203ENST00000416500 ATAD2BQ9ULI0 1458 aa16.59■□□□□ 0.25
LCP1-203ENST00000416500 NCAPD3P42695 1498 aa16.54■□□□□ 0.24
LCP1-203ENST00000416500 SMARCA2P51531 1590 aa16.53■□□□□ 0.24
LCP1-203ENST00000416500 PEG3Q9GZU2 1588 aa16.51■□□□□ 0.23
LCP1-203ENST00000416500 RSF1Q96T23 1441 aaPredicted RBP16.48■□□□□ 0.23
LCP1-203ENST00000416500 WIZO95785 1651 aa16.47■□□□□ 0.23
LCP1-203ENST00000416500 HMGXB3Q12766 1538 aa16.45■□□□□ 0.22
LCP1-203ENST00000416500 BAZ1BQ9UIG0 1483 aaKnown RBP16.43■□□□□ 0.22
LCP1-203ENST00000416500 TOP2AP11388 1531 aaKnown RBP16.25■□□□□ 0.19
LCP1-203ENST00000416500 NESP48681 1621 aa16.17■□□□□ 0.18
LCP1-203ENST00000416500 SUPT5HO00267 1087 aaKnown RBP16.17■□□□□ 0.18
LCP1-203ENST00000416500 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.16■□□□□ 0.18
LCP1-203ENST00000416500 SLC4A1APQ9BWU0 796 aaKnown RBP16.15■□□□□ 0.18
LCP1-203ENST00000416500 CCDC88BA6NC98 1476 aa16.1■□□□□ 0.17
LCP1-203ENST00000416500 CADPSQ9ULU8 1353 aa16.07■□□□□ 0.16
LCP1-203ENST00000416500 LAMC3Q9Y6N6 1575 aa16.07■□□□□ 0.16
LCP1-203ENST00000416500 RNF39Q9H2S5 420 aa16.03■□□□□ 0.16
LCP1-203ENST00000416500 CFTRP13569 1480 aa16■□□□□ 0.15
LCP1-203ENST00000416500 ERCC6Q03468 1493 aa15.99■□□□□ 0.15
LCP1-203ENST00000416500 KIF21AQ7Z4S6 1674 aa15.95■□□□□ 0.14
LCP1-203ENST00000416500 PDS5BQ9NTI5 1447 aa15.95■□□□□ 0.14
LCP1-203ENST00000416500 SLC4A2P04920 1241 aa15.92■□□□□ 0.14
LCP1-203ENST00000416500 FANCD2Q9BXW9 1451 aa15.89■□□□□ 0.13
LCP1-203ENST00000416500 PRDM2Q13029 1718 aa15.88■□□□□ 0.13
LCP1-203ENST00000416500 C1QBPQ07021 282 aaKnown RBP15.86■□□□□ 0.13
LCP1-203ENST00000416500 THOC2Q8NI27 1593 aaKnown RBP15.86■□□□□ 0.13
LCP1-203ENST00000416500 CEP164Q9UPV0 1460 aa15.84■□□□□ 0.13
LCP1-203ENST00000416500 CACNB1Q02641 598 aaPredicted RBP15.83■□□□□ 0.12
LCP1-203ENST00000416500 MRC2Q9UBG0 1479 aa15.8■□□□□ 0.12
LCP1-203ENST00000416500 U3KPZ7 1027 aaPredicted RBP15.79■□□□□ 0.12
LCP1-203ENST00000416500 CUX2O14529 1486 aa15.77■□□□□ 0.11
LCP1-203ENST00000416500 URB2Q14146 1524 aaKnown RBP15.75■□□□□ 0.11
LCP1-203ENST00000416500 WDR62O43379 1518 aa15.74■□□□□ 0.11
LCP1-203ENST00000416500 FOXD4L1Q9NU39 408 aa15.7■□□□□ 0.1
LCP1-203ENST00000416500 EHMT2Q96KQ7 1210 aa15.66■□□□□ 0.1
LCP1-203ENST00000416500 TOPBP1Q92547 1522 aa15.65■□□□□ 0.1
LCP1-203ENST00000416500 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.63■□□□□ 0.09
LCP1-203ENST00000416500 HNRNPUL2Q1KMD3 747 aaKnown RBP15.63■□□□□ 0.09
LCP1-203ENST00000416500 DNMBPQ6XZF7 1577 aa15.62■□□□□ 0.09
LCP1-203ENST00000416500 MYCNP04198 464 aaPredicted RBP15.61■□□□□ 0.09
LCP1-203ENST00000416500 ABCC8Q09428 1581 aa15.6■□□□□ 0.09
LCP1-203ENST00000416500 CUX1P39880 1505 aa15.59■□□□□ 0.09
LCP1-203ENST00000416500 APLP2Q06481 763 aa15.55■□□□□ 0.08
LCP1-203ENST00000416500 ZBTB22O15209 634 aa15.54■□□□□ 0.08
LCP1-203ENST00000416500 POLA1P09884 1462 aaPredicted RBP15.53■□□□□ 0.08
LCP1-203ENST00000416500 SAMD1Q6SPF0 538 aaPredicted RBP15.53■□□□□ 0.08
LCP1-203ENST00000416500 FGD5Q6ZNL6 1462 aa15.51■□□□□ 0.07
LCP1-203ENST00000416500 WRNQ14191 1432 aaPredicted RBP eCLIP15.51■□□□□ 0.07
LCP1-203ENST00000416500 IFT140Q96RY7 1462 aa15.5■□□□□ 0.07
LCP1-203ENST00000416500 RAD54L2Q9Y4B4 1467 aa15.5■□□□□ 0.07
LCP1-203ENST00000416500 SYNJ1O43426 1573 aa15.49■□□□□ 0.07
LCP1-203ENST00000416500 TARBP1Q13395 1621 aaKnown RBP15.48■□□□□ 0.07
LCP1-203ENST00000416500 ZNF608Q9ULD9 1512 aaPredicted RBP15.48■□□□□ 0.07
LCP1-203ENST00000416500 SOGA1O94964 1423 aa15.47■□□□□ 0.07
LCP1-203ENST00000416500 TOP2BQ02880 1626 aa15.46■□□□□ 0.07
LCP1-203ENST00000416500 BIVM-ERCC5R4GMW8 1640 aa15.46■□□□□ 0.06
LCP1-203ENST00000416500 CAPN15O75808 1086 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms