RNA–Protein interactions for RNA: ENST00000528066.1

RCOR3-209, Transcript of REST corepressor 3, humanhuman

TSL 3

Gene RCOR3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCOR3-209ENST00000528066 AEBP2Q6ZN18 517 aaPredicted RBP23.84■■□□□ 1.41
RCOR3-209ENST00000528066 CHIC1Q5VXU3 224 aa22.84■■□□□ 1.25
RCOR3-209ENST00000528066 SENP3Q9H4L4 574 aaPredicted RBP20.21■□□□□ 0.83
RCOR3-209ENST00000528066 PHF23Q9BUL5 403 aaPredicted RBP20.07■□□□□ 0.8
RCOR3-209ENST00000528066 FOXD1Q16676 465 aa18.87■□□□□ 0.61
RCOR3-209ENST00000528066 PLPPR3Q6T4P5 718 aa18.31■□□□□ 0.52
RCOR3-209ENST00000528066 PPP6R1Q9UPN7 881 aa17.85■□□□□ 0.45
RCOR3-209ENST00000528066 ADRA2BP18089 450 aa17.78■□□□□ 0.44
RCOR3-209ENST00000528066 PIAS4Q8N2W9 510 aaPredicted RBP17.63■□□□□ 0.41
RCOR3-209ENST00000528066 MSH5O43196 834 aa17.49■□□□□ 0.39
RCOR3-209ENST00000528066 POTEDQ86YR6 584 aa16.71■□□□□ 0.27
RCOR3-209ENST00000528066 MAPK8IP2Q13387 824 aaPredicted RBP16.27■□□□□ 0.2
RCOR3-209ENST00000528066 SCAF1Q9H7N4 1312 aaKnown RBP16.19■□□□□ 0.18
RCOR3-209ENST00000528066 PPP4R3CPQ6ZMV5 832 aa16.11■□□□□ 0.17
RCOR3-209ENST00000528066 DMRT2Q9Y5R5 561 aa16.09■□□□□ 0.17
RCOR3-209ENST00000528066 CNKSR2Q8WXI2 1034 aa15.74■□□□□ 0.11
RCOR3-209ENST00000528066 HOXD11P31277 338 aaPredicted RBP15.61■□□□□ 0.09
RCOR3-209ENST00000528066 RNF216Q9NWF9 866 aaPredicted RBP15.54■□□□□ 0.08
RCOR3-209ENST00000528066 NCBP3Q53F19 620 aaKnown RBP15.5■□□□□ 0.07
RCOR3-209ENST00000528066 DCAF8L1A6NGE4 600 aa15.35■□□□□ 0.05
RCOR3-209ENST00000528066 NPM3O75607 178 aaKnown RBP15.34■□□□□ 0.05
RCOR3-209ENST00000528066 KCNA4P22459 653 aa15.28■□□□□ 0.04
RCOR3-209ENST00000528066 DNAJC5BQ9UF47 199 aa15.01□□□□□ -0.01
RCOR3-209ENST00000528066 RNF39Q9H2S5 420 aa14.99□□□□□ -0.01
RCOR3-209ENST00000528066 CACNB1Q02641 598 aaPredicted RBP14.86□□□□□ -0.03
RCOR3-209ENST00000528066 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.8□□□□□ -0.04
RCOR3-209ENST00000528066 C1QBPQ07021 282 aaKnown RBP14.75□□□□□ -0.05
RCOR3-209ENST00000528066 SLC4A2P04920 1241 aa14.63□□□□□ -0.07
RCOR3-209ENST00000528066 U3KPZ7 1027 aaPredicted RBP14.59□□□□□ -0.07
RCOR3-209ENST00000528066 SLC4A1APQ9BWU0 796 aaKnown RBP14.43□□□□□ -0.1
RCOR3-209ENST00000528066 SPINK5Q9NQ38 1064 aaPredicted RBP14.31□□□□□ -0.12
RCOR3-209ENST00000528066 CAPN15O75808 1086 aa14.2□□□□□ -0.14
RCOR3-209ENST00000528066 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.17□□□□□ -0.14
RCOR3-209ENST00000528066 HNRNPUL2Q1KMD3 747 aaKnown RBP14.17□□□□□ -0.14
RCOR3-209ENST00000528066 MYCNP04198 464 aaPredicted RBP14.15□□□□□ -0.14
RCOR3-209ENST00000528066 FOXD4L1Q9NU39 408 aa14.14□□□□□ -0.15
RCOR3-209ENST00000528066 DSG3P32926 999 aa14.13□□□□□ -0.15
RCOR3-209ENST00000528066 SAMD1Q6SPF0 538 aaPredicted RBP14.12□□□□□ -0.15
RCOR3-209ENST00000528066 APLP2Q06481 763 aa14.1□□□□□ -0.15
RCOR3-209ENST00000528066 ZBTB22O15209 634 aa14.08□□□□□ -0.16
RCOR3-209ENST00000528066 TRHP20396 242 aaPredicted RBP14.05□□□□□ -0.16
RCOR3-209ENST00000528066 ZNF219Q9P2Y4 722 aaPredicted RBP14.02□□□□□ -0.17
RCOR3-209ENST00000528066 ABCB7O75027 752 aa13.92□□□□□ -0.18
RCOR3-209ENST00000528066 ATF5Q9Y2D1 282 aaPredicted RBP13.87□□□□□ -0.19
RCOR3-209ENST00000528066 POLA2Q14181 598 aa13.74□□□□□ -0.21
RCOR3-209ENST00000528066 ATXN8OSP0DMR3 200 aa13.68□□□□□ -0.22
RCOR3-209ENST00000528066 CSRNP3Q8WYN3 585 aa13.64□□□□□ -0.23
RCOR3-209ENST00000528066 EHMT2Q96KQ7 1210 aa13.53□□□□□ -0.24
RCOR3-209ENST00000528066 ZBTB12Q9Y330 459 aaPredicted RBP13.44□□□□□ -0.26
RCOR3-209ENST00000528066 RBM42Q9BTD8 480 aaKnown RBP13.41□□□□□ -0.26
RCOR3-209ENST00000528066 OSCARQ8IYS5 282 aa13.3□□□□□ -0.28
RCOR3-209ENST00000528066 MKRN4PQ13434 485 aaPredicted RBP13.25□□□□□ -0.29
RCOR3-209ENST00000528066 FBLN2P98095 1184 aa13.21□□□□□ -0.29
RCOR3-209ENST00000528066 AKT1S1Q96B36 256 aa13.18□□□□□ -0.3
RCOR3-209ENST00000528066 POTEHQ6S545 545 aa13.12□□□□□ -0.31
RCOR3-209ENST00000528066 SPDYE2BA6NHP3 402 aa13.08□□□□□ -0.32
RCOR3-209ENST00000528066 SPDYE6P0CI01 402 aa13.08□□□□□ -0.32
RCOR3-209ENST00000528066 SPDYE2Q495Y8 402 aa13.08□□□□□ -0.32
RCOR3-209ENST00000528066 REM2Q8IYK8 340 aaPredicted RBP13.07□□□□□ -0.32
RCOR3-209ENST00000528066 CHRDL2Q6WN34 429 aa13.05□□□□□ -0.32
RCOR3-209ENST00000528066 SSUH2Q9Y2M2 353 aa12.97□□□□□ -0.33
RCOR3-209ENST00000528066 ZNF692Q9BU19 519 aaPredicted RBP12.95□□□□□ -0.34
RCOR3-209ENST00000528066 PITPNM1O00562 1244 aa12.93□□□□□ -0.34
RCOR3-209ENST00000528066 PIP4P2Q8N4L2 257 aa12.81□□□□□ -0.36
RCOR3-209ENST00000528066 FXR2P51116 673 aaKnown RBP eCLIP12.79□□□□□ -0.36
RCOR3-209ENST00000528066 PABPN1Q86U42 306 aaKnown RBP eCLIP12.79□□□□□ -0.36
RCOR3-209ENST00000528066 SPDYE1Q8NFV5 336 aaPredicted RBP12.78□□□□□ -0.36
RCOR3-209ENST00000528066 CLEC11AQ9Y240 323 aa12.74□□□□□ -0.37
RCOR3-209ENST00000528066 SPDYE4A6NLX3 237 aa12.68□□□□□ -0.38
RCOR3-209ENST00000528066 PRKAR2AP13861 404 aaKnown RBP12.58□□□□□ -0.4
RCOR3-209ENST00000528066 PRR29P0C7W0 189 aa12.57□□□□□ -0.4
RCOR3-209ENST00000528066 CHADLQ6NUI6 762 aa12.52□□□□□ -0.41
RCOR3-209ENST00000528066 HAX1O00165 279 aa12.48□□□□□ -0.41
RCOR3-209ENST00000528066 PROM2Q8N271 834 aa12.48□□□□□ -0.41
RCOR3-209ENST00000528066 STAG3Q9UJ98 1225 aa12.45□□□□□ -0.42
RCOR3-209ENST00000528066 EVX2Q03828 476 aa12.43□□□□□ -0.42
RCOR3-209ENST00000528066 SP7Q8TDD2 431 aaPredicted RBP12.41□□□□□ -0.42
RCOR3-209ENST00000528066 CREBZFQ9NS37 354 aa12.37□□□□□ -0.43
RCOR3-209ENST00000528066 C19orf67A6NJJ6 358 aa12.36□□□□□ -0.43
RCOR3-209ENST00000528066 FARP1Q9Y4F1 1045 aaPredicted RBP12.34□□□□□ -0.43
RCOR3-209ENST00000528066 FKBP8Q14318 412 aa12.31□□□□□ -0.44
RCOR3-209ENST00000528066 MNX1P50219 401 aaPredicted RBP12.21□□□□□ -0.45
RCOR3-209ENST00000528066 CD44P16070 742 aaKnown RBP12.19□□□□□ -0.46
RCOR3-209ENST00000528066 GABBR2O75899 941 aa12.11□□□□□ -0.47
RCOR3-209ENST00000528066 NPM1P06748 294 aaKnown RBP eCLIP12.07□□□□□ -0.48
RCOR3-209ENST00000528066 MIER1Q8N108 512 aa12.05□□□□□ -0.48
RCOR3-209ENST00000528066 ZRANB1Q9UGI0 708 aa12.05□□□□□ -0.48
RCOR3-209ENST00000528066 ZNF579Q8NAF0 562 aaKnown RBP12.04□□□□□ -0.48
RCOR3-209ENST00000528066 PLCD3Q8N3E9 789 aa11.97□□□□□ -0.49
RCOR3-209ENST00000528066 CLCN6P51797 869 aa11.96□□□□□ -0.49
RCOR3-209ENST00000528066 PAK3O75914 559 aaPredicted RBP11.95□□□□□ -0.5
RCOR3-209ENST00000528066 PLEKHG5O94827 1062 aa11.95□□□□□ -0.5
RCOR3-209ENST00000528066 PHF12Q96QT6 1004 aa11.94□□□□□ -0.5
RCOR3-209ENST00000528066 FBXO3Q9UK99 471 aa11.93□□□□□ -0.5
RCOR3-209ENST00000528066 POTEIP0CG38 1075 aa11.91□□□□□ -0.5
RCOR3-209ENST00000528066 GALR2O43603 387 aaPredicted RBP11.89□□□□□ -0.51
RCOR3-209ENST00000528066 RASEFQ8IZ41 740 aa11.89□□□□□ -0.51
RCOR3-209ENST00000528066 TSPYL2Q9H2G4 693 aaPredicted RBP11.89□□□□□ -0.51
RCOR3-209ENST00000528066 CCDC61Q9Y6R9 512 aa11.87□□□□□ -0.51
RCOR3-209ENST00000528066 NUBP1P53384 320 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms