Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01558Q9Y6Z2 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01558Q9Y6Z2 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
LINC01558Q9Y6Z2 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC10.73□□□□□ -0.69
LINC01558Q9Y6Z2 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01558Q9Y6Z2 LTF-203ENST00000426532 2494 ntTSL 2 BASIC10.73□□□□□ -0.69
LINC01558Q9Y6Z2 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01558Q9Y6Z2 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01558Q9Y6Z2 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01558Q9Y6Z2 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01558Q9Y6Z2 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01558Q9Y6Z2 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01558Q9Y6Z2 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01558Q9Y6Z2 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01558Q9Y6Z2 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
LINC01558Q9Y6Z2 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
LINC01558Q9Y6Z2 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01558Q9Y6Z2 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC10.72□□□□□ -0.69
LINC01558Q9Y6Z2 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01558Q9Y6Z2 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01558Q9Y6Z2 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC10.72□□□□□ -0.69
LINC01558Q9Y6Z2 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC10.72□□□□□ -0.69
LINC01558Q9Y6Z2 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01558Q9Y6Z2 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
LINC01558Q9Y6Z2 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC10.72□□□□□ -0.69
LINC01558Q9Y6Z2 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01558Q9Y6Z2 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
LINC01558Q9Y6Z2 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC10.72□□□□□ -0.69
LINC01558Q9Y6Z2 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01558Q9Y6Z2 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01558Q9Y6Z2 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
LINC01558Q9Y6Z2 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01558Q9Y6Z2 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01558Q9Y6Z2 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC10.72□□□□□ -0.69
LINC01558Q9Y6Z2 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
LINC01558Q9Y6Z2 PWWP2AP1-201ENST00000429776 2273 ntBASIC10.72□□□□□ -0.69
LINC01558Q9Y6Z2 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC10.72□□□□□ -0.69
LINC01558Q9Y6Z2 AC124067.4-201ENST00000519691 2379 ntBASIC10.72□□□□□ -0.69
LINC01558Q9Y6Z2 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01558Q9Y6Z2 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01558Q9Y6Z2 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC10.71□□□□□ -0.69
LINC01558Q9Y6Z2 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01558Q9Y6Z2 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC10.71□□□□□ -0.69
LINC01558Q9Y6Z2 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
LINC01558Q9Y6Z2 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01558Q9Y6Z2 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01558Q9Y6Z2 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC10.71□□□□□ -0.69
LINC01558Q9Y6Z2 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01558Q9Y6Z2 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC10.71□□□□□ -0.69
LINC01558Q9Y6Z2 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01558Q9Y6Z2 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01558Q9Y6Z2 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01558Q9Y6Z2 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01558Q9Y6Z2 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01558Q9Y6Z2 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01558Q9Y6Z2 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01558Q9Y6Z2 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC10.71□□□□□ -0.69
LINC01558Q9Y6Z2 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC10.71□□□□□ -0.69
LINC01558Q9Y6Z2 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC10.71□□□□□ -0.69
LINC01558Q9Y6Z2 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
LINC01558Q9Y6Z2 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01558Q9Y6Z2 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC10.71□□□□□ -0.69
LINC01558Q9Y6Z2 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC10.71□□□□□ -0.69
LINC01558Q9Y6Z2 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01558Q9Y6Z2 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC10.71□□□□□ -0.69
LINC01558Q9Y6Z2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
LINC01558Q9Y6Z2 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
LINC01558Q9Y6Z2 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
LINC01558Q9Y6Z2 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
LINC01558Q9Y6Z2 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
LINC01558Q9Y6Z2 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
LINC01558Q9Y6Z2 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
LINC01558Q9Y6Z2 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
LINC01558Q9Y6Z2 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
LINC01558Q9Y6Z2 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC10.7□□□□□ -0.7
LINC01558Q9Y6Z2 DET1-207ENST00000564406 2315 ntTSL 2 BASIC10.7□□□□□ -0.7
LINC01558Q9Y6Z2 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01558Q9Y6Z2 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01558Q9Y6Z2 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
LINC01558Q9Y6Z2 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01558Q9Y6Z2 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC10.7□□□□□ -0.7
LINC01558Q9Y6Z2 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC10.7□□□□□ -0.7
LINC01558Q9Y6Z2 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01558Q9Y6Z2 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01558Q9Y6Z2 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01558Q9Y6Z2 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01558Q9Y6Z2 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC10.7□□□□□ -0.7
LINC01558Q9Y6Z2 MFF-203ENST00000349901 1716 ntTSL 2 BASIC10.7□□□□□ -0.7
LINC01558Q9Y6Z2 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01558Q9Y6Z2 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01558Q9Y6Z2 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01558Q9Y6Z2 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
LINC01558Q9Y6Z2 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01558Q9Y6Z2 DENR-202ENST00000455982 1052 ntTSL 5 BASIC10.7□□□□□ -0.7
LINC01558Q9Y6Z2 AC104564.3-201ENST00000582367 638 ntBASIC10.7□□□□□ -0.7
LINC01558Q9Y6Z2 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01558Q9Y6Z2 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC01558Q9Y6Z2 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC10.7□□□□□ -0.7
LINC01558Q9Y6Z2 AC135050.7-201ENST00000624508 2218 ntBASIC10.7□□□□□ -0.7
LINC01558Q9Y6Z2 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms