Protein–RNA interactions for Protein: Q96KA5

CLPTM1L, Cleft lip and palate transmembrane protein 1-like protein, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1LQ96KA5 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLPTM1LQ96KA5 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.74■□□□□ 0.75
CLPTM1LQ96KA5 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLPTM1LQ96KA5 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLPTM1LQ96KA5 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLPTM1LQ96KA5 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLPTM1LQ96KA5 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.73■□□□□ 0.75
CLPTM1LQ96KA5 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLPTM1LQ96KA5 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLPTM1LQ96KA5 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLPTM1LQ96KA5 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLPTM1LQ96KA5 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CLPTM1LQ96KA5 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLPTM1LQ96KA5 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.73■□□□□ 0.75
CLPTM1LQ96KA5 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLPTM1LQ96KA5 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLPTM1LQ96KA5 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLPTM1LQ96KA5 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLPTM1LQ96KA5 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLPTM1LQ96KA5 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLPTM1LQ96KA5 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLPTM1LQ96KA5 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CLPTM1LQ96KA5 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.73■□□□□ 0.75
CLPTM1LQ96KA5 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLPTM1LQ96KA5 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.72■□□□□ 0.75
CLPTM1LQ96KA5 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
CLPTM1LQ96KA5 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLPTM1LQ96KA5 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLPTM1LQ96KA5 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.72■□□□□ 0.75
CLPTM1LQ96KA5 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLPTM1LQ96KA5 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLPTM1LQ96KA5 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLPTM1LQ96KA5 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
CLPTM1LQ96KA5 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CLPTM1LQ96KA5 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLPTM1LQ96KA5 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLPTM1LQ96KA5 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.72■□□□□ 0.75
CLPTM1LQ96KA5 MIR3181-201ENST00000578512 73 ntBASIC19.72■□□□□ 0.75
CLPTM1LQ96KA5 AC099791.2-201ENST00000605725 427 ntBASIC19.72■□□□□ 0.75
CLPTM1LQ96KA5 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
CLPTM1LQ96KA5 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.72■□□□□ 0.75
CLPTM1LQ96KA5 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLPTM1LQ96KA5 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.72■□□□□ 0.75
CLPTM1LQ96KA5 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLPTM1LQ96KA5 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLPTM1LQ96KA5 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLPTM1LQ96KA5 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLPTM1LQ96KA5 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.71■□□□□ 0.75
CLPTM1LQ96KA5 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLPTM1LQ96KA5 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.71■□□□□ 0.75
CLPTM1LQ96KA5 AL033527.3-201ENST00000566366 1196 ntBASIC19.71■□□□□ 0.75
CLPTM1LQ96KA5 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLPTM1LQ96KA5 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLPTM1LQ96KA5 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.71■□□□□ 0.75
CLPTM1LQ96KA5 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CLPTM1LQ96KA5 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.71■□□□□ 0.75
CLPTM1LQ96KA5 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.71■□□□□ 0.75
CLPTM1LQ96KA5 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.7■□□□□ 0.74
CLPTM1LQ96KA5 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLPTM1LQ96KA5 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLPTM1LQ96KA5 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLPTM1LQ96KA5 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLPTM1LQ96KA5 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLPTM1LQ96KA5 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLPTM1LQ96KA5 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CLPTM1LQ96KA5 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CLPTM1LQ96KA5 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CLPTM1LQ96KA5 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLPTM1LQ96KA5 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLPTM1LQ96KA5 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLPTM1LQ96KA5 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.7■□□□□ 0.74
CLPTM1LQ96KA5 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLPTM1LQ96KA5 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLPTM1LQ96KA5 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CLPTM1LQ96KA5 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLPTM1LQ96KA5 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLPTM1LQ96KA5 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLPTM1LQ96KA5 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLPTM1LQ96KA5 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLPTM1LQ96KA5 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLPTM1LQ96KA5 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLPTM1LQ96KA5 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.69■□□□□ 0.74
CLPTM1LQ96KA5 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CLPTM1LQ96KA5 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLPTM1LQ96KA5 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.69■□□□□ 0.74
CLPTM1LQ96KA5 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.69■□□□□ 0.74
CLPTM1LQ96KA5 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.69■□□□□ 0.74
CLPTM1LQ96KA5 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLPTM1LQ96KA5 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.69■□□□□ 0.74
CLPTM1LQ96KA5 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLPTM1LQ96KA5 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLPTM1LQ96KA5 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CLPTM1LQ96KA5 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.69■□□□□ 0.74
CLPTM1LQ96KA5 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLPTM1LQ96KA5 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLPTM1LQ96KA5 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLPTM1LQ96KA5 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLPTM1LQ96KA5 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLPTM1LQ96KA5 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLPTM1LQ96KA5 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms