Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC46Q96FV0 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.45■□□□□ 0.54
LRRC46Q96FV0 ITM2C-210ENST00000620962 501 ntBASIC18.45■□□□□ 0.54
LRRC46Q96FV0 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.45■□□□□ 0.54
LRRC46Q96FV0 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.45■□□□□ 0.54
LRRC46Q96FV0 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC46Q96FV0 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
LRRC46Q96FV0 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
LRRC46Q96FV0 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC46Q96FV0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC46Q96FV0 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC46Q96FV0 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC46Q96FV0 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC46Q96FV0 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC46Q96FV0 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
LRRC46Q96FV0 AC139530.1-201ENST00000575312 1977 ntBASIC18.44■□□□□ 0.54
LRRC46Q96FV0 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC46Q96FV0 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.44■□□□□ 0.54
LRRC46Q96FV0 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC46Q96FV0 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC46Q96FV0 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC46Q96FV0 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.44■□□□□ 0.54
LRRC46Q96FV0 CDV3P1-201ENST00000471403 739 ntBASIC18.44■□□□□ 0.54
LRRC46Q96FV0 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.44■□□□□ 0.54
LRRC46Q96FV0 MIR4651-201ENST00000582622 73 ntBASIC18.44■□□□□ 0.54
LRRC46Q96FV0 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.44■□□□□ 0.54
LRRC46Q96FV0 AC066615.1-201ENST00000640911 628 ntBASIC18.44■□□□□ 0.54
LRRC46Q96FV0 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC46Q96FV0 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC46Q96FV0 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC46Q96FV0 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC46Q96FV0 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC46Q96FV0 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.44■□□□□ 0.54
LRRC46Q96FV0 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC46Q96FV0 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC46Q96FV0 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC46Q96FV0 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.43■□□□□ 0.54
LRRC46Q96FV0 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRC46Q96FV0 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
LRRC46Q96FV0 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LRRC46Q96FV0 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
LRRC46Q96FV0 AC245052.3-201ENST00000450182 901 ntBASIC18.43■□□□□ 0.54
LRRC46Q96FV0 AC093787.1-201ENST00000450396 207 ntBASIC18.43■□□□□ 0.54
LRRC46Q96FV0 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.43■□□□□ 0.54
LRRC46Q96FV0 RARRES2P4-201ENST00000514074 484 ntBASIC18.43■□□□□ 0.54
LRRC46Q96FV0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.43■□□□□ 0.54
LRRC46Q96FV0 AC098934.4-201ENST00000564127 592 ntBASIC18.43■□□□□ 0.54
LRRC46Q96FV0 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.43■□□□□ 0.54
LRRC46Q96FV0 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.43■□□□□ 0.54
LRRC46Q96FV0 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.43■□□□□ 0.54
LRRC46Q96FV0 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.43■□□□□ 0.54
LRRC46Q96FV0 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRC46Q96FV0 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRC46Q96FV0 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRC46Q96FV0 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRC46Q96FV0 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
LRRC46Q96FV0 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LRRC46Q96FV0 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.43■□□□□ 0.54
LRRC46Q96FV0 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRC46Q96FV0 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC46Q96FV0 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
LRRC46Q96FV0 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC46Q96FV0 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC46Q96FV0 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.42■□□□□ 0.54
LRRC46Q96FV0 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC46Q96FV0 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
LRRC46Q96FV0 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.42■□□□□ 0.54
LRRC46Q96FV0 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
LRRC46Q96FV0 LSM12P1-201ENST00000411836 588 ntBASIC18.42■□□□□ 0.54
LRRC46Q96FV0 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC46Q96FV0 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC46Q96FV0 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.42■□□□□ 0.54
LRRC46Q96FV0 AP006294.2-201ENST00000641667 209 ntBASIC18.42■□□□□ 0.54
LRRC46Q96FV0 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
LRRC46Q96FV0 AC087742.1-201ENST00000575880 1738 ntBASIC18.42■□□□□ 0.54
LRRC46Q96FV0 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
LRRC46Q96FV0 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
LRRC46Q96FV0 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.42■□□□□ 0.54
LRRC46Q96FV0 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC46Q96FV0 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC46Q96FV0 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC46Q96FV0 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
LRRC46Q96FV0 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC46Q96FV0 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC46Q96FV0 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.41■□□□□ 0.54
LRRC46Q96FV0 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.41■□□□□ 0.54
LRRC46Q96FV0 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC46Q96FV0 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.41■□□□□ 0.54
LRRC46Q96FV0 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
LRRC46Q96FV0 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.41■□□□□ 0.54
LRRC46Q96FV0 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
LRRC46Q96FV0 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
LRRC46Q96FV0 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC46Q96FV0 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.41■□□□□ 0.54
LRRC46Q96FV0 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
LRRC46Q96FV0 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC46Q96FV0 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC46Q96FV0 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC46Q96FV0 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC46Q96FV0 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms