Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM11Q96F44 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM11Q96F44 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM11Q96F44 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM11Q96F44 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM11Q96F44 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM11Q96F44 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM11Q96F44 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM11Q96F44 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM11Q96F44 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM11Q96F44 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
TRIM11Q96F44 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM11Q96F44 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM11Q96F44 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.73■■□□□ 1.07
TRIM11Q96F44 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM11Q96F44 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM11Q96F44 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM11Q96F44 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM11Q96F44 AC092667.1-201ENST00000434301 2586 ntBASIC21.73■■□□□ 1.07
TRIM11Q96F44 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM11Q96F44 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM11Q96F44 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM11Q96F44 RBM17P2-201ENST00000616397 1405 ntBASIC21.72■■□□□ 1.07
TRIM11Q96F44 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.72■■□□□ 1.07
TRIM11Q96F44 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.72■■□□□ 1.07
TRIM11Q96F44 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.72■■□□□ 1.07
TRIM11Q96F44 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.72■■□□□ 1.07
TRIM11Q96F44 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM11Q96F44 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
TRIM11Q96F44 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM11Q96F44 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
TRIM11Q96F44 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM11Q96F44 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM11Q96F44 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
TRIM11Q96F44 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM11Q96F44 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.72■■□□□ 1.07
TRIM11Q96F44 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM11Q96F44 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM11Q96F44 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM11Q96F44 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM11Q96F44 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM11Q96F44 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM11Q96F44 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.71■■□□□ 1.07
TRIM11Q96F44 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.71■■□□□ 1.07
TRIM11Q96F44 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM11Q96F44 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.71■■□□□ 1.07
TRIM11Q96F44 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.71■■□□□ 1.07
TRIM11Q96F44 AC019069.1-201ENST00000610008 1333 ntBASIC21.71■■□□□ 1.07
TRIM11Q96F44 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM11Q96F44 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.71■■□□□ 1.07
TRIM11Q96F44 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
TRIM11Q96F44 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.7■■□□□ 1.07
TRIM11Q96F44 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM11Q96F44 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
TRIM11Q96F44 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.7■■□□□ 1.06
TRIM11Q96F44 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM11Q96F44 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.7■■□□□ 1.06
TRIM11Q96F44 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM11Q96F44 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
TRIM11Q96F44 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.7■■□□□ 1.06
TRIM11Q96F44 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.7■■□□□ 1.06
TRIM11Q96F44 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.7■■□□□ 1.06
TRIM11Q96F44 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.7■■□□□ 1.06
TRIM11Q96F44 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.7■■□□□ 1.06
TRIM11Q96F44 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM11Q96F44 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.7■■□□□ 1.06
TRIM11Q96F44 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM11Q96F44 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
TRIM11Q96F44 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
TRIM11Q96F44 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
TRIM11Q96F44 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM11Q96F44 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM11Q96F44 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM11Q96F44 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.69■■□□□ 1.06
TRIM11Q96F44 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.69■■□□□ 1.06
TRIM11Q96F44 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM11Q96F44 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM11Q96F44 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
TRIM11Q96F44 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM11Q96F44 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.69■■□□□ 1.06
TRIM11Q96F44 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.69■■□□□ 1.06
TRIM11Q96F44 AC091799.1-201ENST00000422823 811 ntBASIC21.69■■□□□ 1.06
TRIM11Q96F44 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
TRIM11Q96F44 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.69■■□□□ 1.06
TRIM11Q96F44 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM11Q96F44 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.69■■□□□ 1.06
TRIM11Q96F44 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
TRIM11Q96F44 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM11Q96F44 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
TRIM11Q96F44 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
TRIM11Q96F44 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.69■■□□□ 1.06
TRIM11Q96F44 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM11Q96F44 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM11Q96F44 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM11Q96F44 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
TRIM11Q96F44 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
TRIM11Q96F44 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
TRIM11Q96F44 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
TRIM11Q96F44 AC007322.3-201ENST00000426526 701 ntBASIC21.68■■□□□ 1.06
TRIM11Q96F44 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms