Protein–RNA interactions for Protein: Q8WV16

DCAF4, DDB1- and CUL4-associated factor 4, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF4Q8WV16 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
DCAF4Q8WV16 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC23.83■■□□□ 1.4
DCAF4Q8WV16 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
DCAF4Q8WV16 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.4
DCAF4Q8WV16 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.4
DCAF4Q8WV16 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
DCAF4Q8WV16 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
DCAF4Q8WV16 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
DCAF4Q8WV16 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC23.82■■□□□ 1.4
DCAF4Q8WV16 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
DCAF4Q8WV16 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
DCAF4Q8WV16 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
DCAF4Q8WV16 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC23.82■■□□□ 1.4
DCAF4Q8WV16 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
DCAF4Q8WV16 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC23.82■■□□□ 1.4
DCAF4Q8WV16 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
DCAF4Q8WV16 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC23.82■■□□□ 1.4
DCAF4Q8WV16 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC23.82■■□□□ 1.4
DCAF4Q8WV16 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
DCAF4Q8WV16 FAM201B-201ENST00000458407 597 ntBASIC23.82■■□□□ 1.4
DCAF4Q8WV16 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
DCAF4Q8WV16 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
DCAF4Q8WV16 AC079834.2-201ENST00000609776 1949 ntBASIC23.82■■□□□ 1.4
DCAF4Q8WV16 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
DCAF4Q8WV16 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
DCAF4Q8WV16 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC23.82■■□□□ 1.4
DCAF4Q8WV16 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
DCAF4Q8WV16 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
DCAF4Q8WV16 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
DCAF4Q8WV16 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
DCAF4Q8WV16 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
DCAF4Q8WV16 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
DCAF4Q8WV16 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
DCAF4Q8WV16 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC23.81■■□□□ 1.4
DCAF4Q8WV16 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC23.81■■□□□ 1.4
DCAF4Q8WV16 POU5F1P3-201ENST00000428824 1078 ntBASIC23.81■■□□□ 1.4
DCAF4Q8WV16 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC23.81■■□□□ 1.4
DCAF4Q8WV16 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
DCAF4Q8WV16 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC23.81■■□□□ 1.4
DCAF4Q8WV16 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC23.81■■□□□ 1.4
DCAF4Q8WV16 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
DCAF4Q8WV16 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC23.81■■□□□ 1.4
DCAF4Q8WV16 TMEM191A-211ENST00000637163 1067 ntBASIC23.81■■□□□ 1.4
DCAF4Q8WV16 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
DCAF4Q8WV16 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
DCAF4Q8WV16 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
DCAF4Q8WV16 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC23.8■■□□□ 1.4
DCAF4Q8WV16 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC23.8■■□□□ 1.4
DCAF4Q8WV16 GAS7-202ENST00000396115 929 ntTSL 5 BASIC23.8■■□□□ 1.4
DCAF4Q8WV16 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC23.8■■□□□ 1.4
DCAF4Q8WV16 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC23.8■■□□□ 1.4
DCAF4Q8WV16 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC23.8■■□□□ 1.4
DCAF4Q8WV16 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC23.8■■□□□ 1.4
DCAF4Q8WV16 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
DCAF4Q8WV16 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.8■■□□□ 1.4
DCAF4Q8WV16 AL356652.1-201ENST00000615962 565 ntBASIC23.8■■□□□ 1.4
DCAF4Q8WV16 HLA-B-256ENST00000639848 1089 ntBASIC23.8■■□□□ 1.4
DCAF4Q8WV16 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
DCAF4Q8WV16 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC23.8■■□□□ 1.4
DCAF4Q8WV16 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC23.8■■□□□ 1.4
DCAF4Q8WV16 FEM1AP4-201ENST00000443167 1987 ntBASIC23.8■■□□□ 1.4
DCAF4Q8WV16 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
DCAF4Q8WV16 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
DCAF4Q8WV16 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC23.79■■□□□ 1.4
DCAF4Q8WV16 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
DCAF4Q8WV16 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
DCAF4Q8WV16 AC060766.5-201ENST00000590539 871 ntBASIC23.79■■□□□ 1.4
DCAF4Q8WV16 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC23.79■■□□□ 1.4
DCAF4Q8WV16 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC23.79■■□□□ 1.4
DCAF4Q8WV16 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
DCAF4Q8WV16 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
DCAF4Q8WV16 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
DCAF4Q8WV16 LINC00565-201ENST00000562710 2331 ntBASIC23.78■■□□□ 1.4
DCAF4Q8WV16 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
DCAF4Q8WV16 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
DCAF4Q8WV16 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
DCAF4Q8WV16 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC23.78■■□□□ 1.4
DCAF4Q8WV16 UNC93B5-201ENST00000530315 699 ntBASIC23.78■■□□□ 1.4
DCAF4Q8WV16 C2orf69P4-201ENST00000565394 541 ntBASIC23.78■■□□□ 1.4
DCAF4Q8WV16 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC23.78■■□□□ 1.4
DCAF4Q8WV16 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
DCAF4Q8WV16 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
DCAF4Q8WV16 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
DCAF4Q8WV16 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
DCAF4Q8WV16 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
DCAF4Q8WV16 STAC-204ENST00000457375 1366 ntTSL 2 BASIC23.78■■□□□ 1.4
DCAF4Q8WV16 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
DCAF4Q8WV16 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
DCAF4Q8WV16 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC23.77■■□□□ 1.4
DCAF4Q8WV16 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
DCAF4Q8WV16 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
DCAF4Q8WV16 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
DCAF4Q8WV16 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
DCAF4Q8WV16 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
DCAF4Q8WV16 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
DCAF4Q8WV16 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
DCAF4Q8WV16 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
DCAF4Q8WV16 MFF-205ENST00000354503 1085 ntTSL 2 BASIC23.77■■□□□ 1.4
DCAF4Q8WV16 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC23.77■■□□□ 1.4
DCAF4Q8WV16 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms