Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC01560Q8TB33 MIR718-201ENST00000390190 70 ntBASIC17.86■□□□□ 0.45
LINC01560Q8TB33 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
LINC01560Q8TB33 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.86■□□□□ 0.45
LINC01560Q8TB33 C2orf69P4-201ENST00000565394 541 ntBASIC17.86■□□□□ 0.45
LINC01560Q8TB33 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
LINC01560Q8TB33 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.86■□□□□ 0.45
LINC01560Q8TB33 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.86■□□□□ 0.45
LINC01560Q8TB33 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC01560Q8TB33 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
LINC01560Q8TB33 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC01560Q8TB33 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC01560Q8TB33 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LINC01560Q8TB33 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LINC01560Q8TB33 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC01560Q8TB33 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC17.86■□□□□ 0.45
LINC01560Q8TB33 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LINC01560Q8TB33 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LINC01560Q8TB33 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LINC01560Q8TB33 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
LINC01560Q8TB33 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LINC01560Q8TB33 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LINC01560Q8TB33 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.85■□□□□ 0.45
LINC01560Q8TB33 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LINC01560Q8TB33 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.85■□□□□ 0.45
LINC01560Q8TB33 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
LINC01560Q8TB33 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.85■□□□□ 0.45
LINC01560Q8TB33 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.85■□□□□ 0.45
LINC01560Q8TB33 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.85■□□□□ 0.45
LINC01560Q8TB33 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LINC01560Q8TB33 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LINC01560Q8TB33 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LINC01560Q8TB33 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC17.84■□□□□ 0.45
LINC01560Q8TB33 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
LINC01560Q8TB33 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LINC01560Q8TB33 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LINC01560Q8TB33 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LINC01560Q8TB33 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LINC01560Q8TB33 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.84■□□□□ 0.45
LINC01560Q8TB33 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
LINC01560Q8TB33 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.84■□□□□ 0.45
LINC01560Q8TB33 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LINC01560Q8TB33 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LINC01560Q8TB33 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.84■□□□□ 0.45
LINC01560Q8TB33 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LINC01560Q8TB33 POM121L13P-201ENST00000422362 380 ntBASIC17.84■□□□□ 0.45
LINC01560Q8TB33 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LINC01560Q8TB33 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.84■□□□□ 0.45
LINC01560Q8TB33 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.84■□□□□ 0.45
LINC01560Q8TB33 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.84■□□□□ 0.45
LINC01560Q8TB33 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.84■□□□□ 0.45
LINC01560Q8TB33 Z99916.2-201ENST00000604037 246 ntBASIC17.84■□□□□ 0.45
LINC01560Q8TB33 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.84■□□□□ 0.45
LINC01560Q8TB33 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
LINC01560Q8TB33 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.84■□□□□ 0.45
LINC01560Q8TB33 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LINC01560Q8TB33 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LINC01560Q8TB33 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LINC01560Q8TB33 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LINC01560Q8TB33 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC17.83■□□□□ 0.45
LINC01560Q8TB33 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.83■□□□□ 0.45
LINC01560Q8TB33 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.83■□□□□ 0.45
LINC01560Q8TB33 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LINC01560Q8TB33 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
LINC01560Q8TB33 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LINC01560Q8TB33 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LINC01560Q8TB33 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.83■□□□□ 0.44
LINC01560Q8TB33 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
LINC01560Q8TB33 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.83■□□□□ 0.44
LINC01560Q8TB33 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
LINC01560Q8TB33 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
LINC01560Q8TB33 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LINC01560Q8TB33 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.44
LINC01560Q8TB33 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
LINC01560Q8TB33 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LINC01560Q8TB33 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
LINC01560Q8TB33 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LINC01560Q8TB33 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LINC01560Q8TB33 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
LINC01560Q8TB33 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LINC01560Q8TB33 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
LINC01560Q8TB33 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LINC01560Q8TB33 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
LINC01560Q8TB33 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.82■□□□□ 0.44
LINC01560Q8TB33 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LINC01560Q8TB33 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LINC01560Q8TB33 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.82■□□□□ 0.44
LINC01560Q8TB33 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LINC01560Q8TB33 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LINC01560Q8TB33 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
LINC01560Q8TB33 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LINC01560Q8TB33 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.82■□□□□ 0.44
LINC01560Q8TB33 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.82■□□□□ 0.44
LINC01560Q8TB33 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
LINC01560Q8TB33 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.82■□□□□ 0.44
LINC01560Q8TB33 GUSBP5-202ENST00000510805 1989 ntBASIC17.82■□□□□ 0.44
LINC01560Q8TB33 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LINC01560Q8TB33 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
LINC01560Q8TB33 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LINC01560Q8TB33 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms