Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDH19Q8TAB3 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDH19Q8TAB3 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDH19Q8TAB3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDH19Q8TAB3 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDH19Q8TAB3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDH19Q8TAB3 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.25■□□□□ 0.99
PCDH19Q8TAB3 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDH19Q8TAB3 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
PCDH19Q8TAB3 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.25■□□□□ 0.99
PCDH19Q8TAB3 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.25■□□□□ 0.99
PCDH19Q8TAB3 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.25■□□□□ 0.99
PCDH19Q8TAB3 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.25■□□□□ 0.99
PCDH19Q8TAB3 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
PCDH19Q8TAB3 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDH19Q8TAB3 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
PCDH19Q8TAB3 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
PCDH19Q8TAB3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDH19Q8TAB3 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.24■□□□□ 0.99
PCDH19Q8TAB3 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.24■□□□□ 0.99
PCDH19Q8TAB3 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
PCDH19Q8TAB3 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
PCDH19Q8TAB3 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDH19Q8TAB3 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDH19Q8TAB3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.24■□□□□ 0.99
PCDH19Q8TAB3 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDH19Q8TAB3 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.24■□□□□ 0.99
PCDH19Q8TAB3 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.24■□□□□ 0.99
PCDH19Q8TAB3 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.24■□□□□ 0.99
PCDH19Q8TAB3 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDH19Q8TAB3 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDH19Q8TAB3 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.24■□□□□ 0.99
PCDH19Q8TAB3 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.24■□□□□ 0.99
PCDH19Q8TAB3 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.24■□□□□ 0.99
PCDH19Q8TAB3 AL121603.2-201ENST00000557373 2117 ntBASIC21.24■□□□□ 0.99
PCDH19Q8TAB3 AC137761.2-201ENST00000561729 223 ntBASIC21.24■□□□□ 0.99
PCDH19Q8TAB3 AC145350.3-201ENST00000569033 163 ntBASIC21.24■□□□□ 0.99
PCDH19Q8TAB3 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.24■□□□□ 0.99
PCDH19Q8TAB3 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDH19Q8TAB3 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDH19Q8TAB3 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDH19Q8TAB3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDH19Q8TAB3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDH19Q8TAB3 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.24■□□□□ 0.99
PCDH19Q8TAB3 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.24■□□□□ 0.99
PCDH19Q8TAB3 GABARAPL3-202ENST00000624044 1851 ntBASIC21.24■□□□□ 0.99
PCDH19Q8TAB3 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDH19Q8TAB3 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDH19Q8TAB3 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH19Q8TAB3 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH19Q8TAB3 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH19Q8TAB3 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH19Q8TAB3 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.23■□□□□ 0.99
PCDH19Q8TAB3 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH19Q8TAB3 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH19Q8TAB3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.23■□□□□ 0.99
PCDH19Q8TAB3 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.23■□□□□ 0.99
PCDH19Q8TAB3 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH19Q8TAB3 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.23■□□□□ 0.99
PCDH19Q8TAB3 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.23■□□□□ 0.99
PCDH19Q8TAB3 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.23■□□□□ 0.99
PCDH19Q8TAB3 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
PCDH19Q8TAB3 AC010536.3-201ENST00000620306 533 ntBASIC21.23■□□□□ 0.99
PCDH19Q8TAB3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH19Q8TAB3 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH19Q8TAB3 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH19Q8TAB3 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PCDH19Q8TAB3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PCDH19Q8TAB3 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
PCDH19Q8TAB3 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
PCDH19Q8TAB3 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.22■□□□□ 0.99
PCDH19Q8TAB3 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDH19Q8TAB3 AC016769.1-201ENST00000409132 1010 ntBASIC21.22■□□□□ 0.99
PCDH19Q8TAB3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.22■□□□□ 0.99
PCDH19Q8TAB3 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
PCDH19Q8TAB3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
PCDH19Q8TAB3 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.22■□□□□ 0.99
PCDH19Q8TAB3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PCDH19Q8TAB3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
PCDH19Q8TAB3 AC073130.3-201ENST00000624389 2278 ntBASIC21.22■□□□□ 0.99
PCDH19Q8TAB3 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDH19Q8TAB3 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.22■□□□□ 0.99
PCDH19Q8TAB3 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDH19Q8TAB3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
PCDH19Q8TAB3 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDH19Q8TAB3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDH19Q8TAB3 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PCDH19Q8TAB3 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDH19Q8TAB3 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDH19Q8TAB3 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
PCDH19Q8TAB3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
PCDH19Q8TAB3 AC006015.1-201ENST00000429970 570 ntBASIC21.21■□□□□ 0.99
PCDH19Q8TAB3 TERF1P5-201ENST00000477545 1207 ntBASIC21.21■□□□□ 0.99
PCDH19Q8TAB3 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PCDH19Q8TAB3 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.21■□□□□ 0.99
PCDH19Q8TAB3 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PCDH19Q8TAB3 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
PCDH19Q8TAB3 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.21■□□□□ 0.99
PCDH19Q8TAB3 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
PCDH19Q8TAB3 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms