Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.71■□□□□ 0.59
CLDN22Q8N7P3 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN22Q8N7P3 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN22Q8N7P3 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.71■□□□□ 0.59
CLDN22Q8N7P3 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN22Q8N7P3 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.71■□□□□ 0.59
CLDN22Q8N7P3 FP700111.2-201ENST00000619190 1892 ntBASIC18.71■□□□□ 0.59
CLDN22Q8N7P3 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CLDN22Q8N7P3 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN22Q8N7P3 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN22Q8N7P3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN22Q8N7P3 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN22Q8N7P3 IRS3P-201ENST00000223076 1006 ntBASIC18.7■□□□□ 0.58
CLDN22Q8N7P3 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CLDN22Q8N7P3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN22Q8N7P3 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
CLDN22Q8N7P3 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CLDN22Q8N7P3 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN22Q8N7P3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.7■□□□□ 0.58
CLDN22Q8N7P3 AL358852.1-201ENST00000623174 1268 ntBASIC18.7■□□□□ 0.58
CLDN22Q8N7P3 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CLDN22Q8N7P3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.7■□□□□ 0.58
CLDN22Q8N7P3 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN22Q8N7P3 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN22Q8N7P3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CLDN22Q8N7P3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN22Q8N7P3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN22Q8N7P3 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.7■□□□□ 0.58
CLDN22Q8N7P3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN22Q8N7P3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN22Q8N7P3 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN22Q8N7P3 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN22Q8N7P3 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN22Q8N7P3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
CLDN22Q8N7P3 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN22Q8N7P3 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CLDN22Q8N7P3 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN22Q8N7P3 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.69■□□□□ 0.58
CLDN22Q8N7P3 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN22Q8N7P3 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN22Q8N7P3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CLDN22Q8N7P3 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN22Q8N7P3 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN22Q8N7P3 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN22Q8N7P3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CLDN22Q8N7P3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.69■□□□□ 0.58
CLDN22Q8N7P3 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN22Q8N7P3 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CLDN22Q8N7P3 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN22Q8N7P3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN22Q8N7P3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN22Q8N7P3 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN22Q8N7P3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN22Q8N7P3 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN22Q8N7P3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN22Q8N7P3 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CLDN22Q8N7P3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.68■□□□□ 0.58
CLDN22Q8N7P3 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.68■□□□□ 0.58
CLDN22Q8N7P3 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CLDN22Q8N7P3 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN22Q8N7P3 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.68■□□□□ 0.58
CLDN22Q8N7P3 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.68■□□□□ 0.58
CLDN22Q8N7P3 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.68■□□□□ 0.58
CLDN22Q8N7P3 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN22Q8N7P3 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.68■□□□□ 0.58
CLDN22Q8N7P3 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN22Q8N7P3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN22Q8N7P3 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN22Q8N7P3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN22Q8N7P3 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CLDN22Q8N7P3 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN22Q8N7P3 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.68■□□□□ 0.58
CLDN22Q8N7P3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN22Q8N7P3 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN22Q8N7P3 AC061975.6-201ENST00000579045 1553 ntBASIC18.68■□□□□ 0.58
CLDN22Q8N7P3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.68■□□□□ 0.58
CLDN22Q8N7P3 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN22Q8N7P3 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN22Q8N7P3 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN22Q8N7P3 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN22Q8N7P3 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN22Q8N7P3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN22Q8N7P3 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CLDN22Q8N7P3 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.67■□□□□ 0.58
CLDN22Q8N7P3 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN22Q8N7P3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.67■□□□□ 0.58
CLDN22Q8N7P3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
CLDN22Q8N7P3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
CLDN22Q8N7P3 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN22Q8N7P3 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN22Q8N7P3 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN22Q8N7P3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.67■□□□□ 0.58
CLDN22Q8N7P3 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.67■□□□□ 0.58
CLDN22Q8N7P3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN22Q8N7P3 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN22Q8N7P3 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.67■□□□□ 0.58
CLDN22Q8N7P3 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CLDN22Q8N7P3 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.66■□□□□ 0.58
CLDN22Q8N7P3 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN22Q8N7P3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms